RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 C10orf111Q8N326 155 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SAMD12Q8N8I0 201 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 LHX4Q969G2 390 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PITX2Q99697 317 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 EBF4Q9BQW3 602 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 NSRP1Q9H0G5 558 aaKnown RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 HDHD2Q9H0R4 259 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SLC25A19Q9HC21 320 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 UFSP2Q9NUQ7 469 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ARGLU1Q9NWB6 273 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 GID8Q9NWU2 228 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 AP3M1Q9Y2T2 418 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 FAM32AQ9Y421 112 aaKnown RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 V9GYY5 206 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 CUBNO60494 3623 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF816-ZNF321PA0A0X1KG74 233 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 GGT3PA6NGU5 568 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 IQCF6A8MYZ5 107 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 F5H5K5 113 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 H0YL77 283 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 H7C1C5 153 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 RER1O15258 196 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NDUFB3O43676 98 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 CLPXO76031 633 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NDUFB2O95178 105 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 HLA-DPB1P04440 258 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SFTPBP07988 381 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 CCDC159P0C7I6 412 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 KDELR2P33947 212 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 LCN6P62502 163 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SELENOWP63302 87 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 PRKCDQ05655 676 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 KRR1Q13601 381 aaKnown RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SELPLGQ14242 412 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 MICBQ29980 383 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 LRRC23Q53EV4 343 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 CYBRD1Q53TN4 286 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 TMEM255AQ5JRV8 349 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 METTL21CQ5VZV1 264 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NANOGP8Q6NSW7 305 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 CD164L2Q6UWJ8 174 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 MBOAT2Q6ZWT7 520 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SLC36A1Q7Z2H8 476 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NRMQ8IXM6 262 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 ZSCAN4Q8NAM6 433 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 OR4S1Q8NGB4 309 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 OR8J3Q8NGG0 315 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 OR4D11Q8NGI4 311 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 OR13C2Q8NGS9 318 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 OR8S1Q8NH09 359 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 C10orf82Q8WW14 230 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 ACOT11Q8WXI4 607 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SLC7A6Q92536 515 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SPTSSAQ969W0 71 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 RAB3CQ96E17 227 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 PRRC1Q96M27 445 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 COQ7Q99807 217 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SIKE1Q9BRV8 207 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SYT4Q9H2B2 425 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 C16orf95Q9H693 158 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 NMNAT1Q9HAN9 279 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 RAB18Q9NP72 206 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 ONECUT1Q9UBC0 465 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 TMCC3Q9ULS5 477 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 SOX21Q9Y651 276 aaPredicted RBP3.8□□□□□ -1.8
HIF1A-209ENST00000556827 KPTNQ9Y664 436 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
HIF1A-209ENST00000556827 A0A0G2JND7 137 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ANKRD30BLA7E2S9 258 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 BBIP1A8MTZ0 92 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 RNASEK-C17orf49H0YIS7 233 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 MRASO14807 208 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PHOX2AO14813 284 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF682O95780 498 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 TXNDC12O95881 172 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OPN1MWP04001 364 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OPN1MW2P0DN77 364 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OPN1MW3P0DN78 364 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 TROVE2P10155 538 aaKnown RBP eCLIP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 MUC1P15941 1255 aaPredicted RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 CTLA4P16410 223 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF823P16415 610 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PAICSP22234 425 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 MDH1P40925 334 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PMELP40967 661 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 CD200P41217 278 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 GPR4P46093 362 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 YAP1P46937 504 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ERFP50548 548 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 SLC7A2P52569 658 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 SMIM11AP58511 58 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 HERV-K104P63124 156 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 EMX1Q04741 257 aaPredicted RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 HERPUD1Q15011 391 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 SNCBQ16143 134 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms