RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 hCG_1809904A0A1W2PP81 198 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PPE2 198 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PR64 198 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PRV1 198 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 TMEM30CPA0ZSE6 113 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 UBE2QL1A1L167 161 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 SOCS1O15524 211 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 COX7A1P24310 79 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 CHATP28329 748 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 SCGB2A2Q13296 93 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 PRAMEF5Q5TYX0 476 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 NCR3LG1Q68D85 454 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 HCP5Q6MZN7 132 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 SLC16A12Q6ZSM3 486 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 C6orf201Q7Z4U5 140 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 GPR141Q7Z602 305 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 MRGPRDQ8TDS7 321 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 NEDD4LQ96PU5 975 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 UNKLQ9H9P5 680 aaKnown RBP14.3□□□□□ -0.12
SHMT2-225ENST00000556798 ETAA1Q9NY74 926 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 FBLN5Q9UBX5 448 aa14.3□□□□□ -0.12
SHMT2-225ENST00000556798 MMP23AO75900 390 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 CLPXO76031 633 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 IGHV1-8P0DP01 117 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 SNRPBP14678 240 aaKnown RBP14.29□□□□□ -0.12
SHMT2-225ENST00000556798 OMGP23515 440 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 FPR2P25090 351 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-225ENST00000556798 GDNFP39905 211 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 RANBP1P43487 201 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 VEGFCP49767 419 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 VBP1P61758 197 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 SRSF2Q01130 221 aaKnown RBP14.29□□□□□ -0.12
SHMT2-225ENST00000556798 PAX5Q02548 391 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 RBM39Q14498 530 aaKnown RBP14.29□□□□□ -0.12
SHMT2-225ENST00000556798 IDNKQ5T6J7 187 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 GPR107Q5VW38 600 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 SLC35E4Q6ICL7 350 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 BAIAP2L2Q6UXY1 529 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 LGALS14Q8TCE9 139 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 CCDC107Q8WV48 283 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 CORO2AQ92828 525 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 ZNF48Q96MX3 618 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-225ENST00000556798 SULT4A1Q9BR01 284 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 GAL3ST2Q9H3Q3 398 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 OR6C3Q9NZP0 311 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 RAB22AQ9UL26 194 aa14.29□□□□□ -0.12
SHMT2-225ENST00000556798 FAM172BPA6NC97 362 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 IFNA2P01563 188 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 RBP4P02753 201 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 SERPINB10P48595 397 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 C17orf58Q2M2W7 97 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 FAM89BQ8N5H3 189 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 FAAP24Q9BTP7 215 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 TAS2R3Q9NYW6 316 aa14.28□□□□□ -0.12
SHMT2-225ENST00000556798 ZNF729A6NN14 1252 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-225ENST00000556798 FOXI3A8MTJ6 420 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-225ENST00000556798 H3BUI4 141 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 GABARAPO95166 117 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 PAHP00439 452 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 MT-ND4P03905 459 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 CDK2P24941 298 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 SSTR5P35346 364 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 RPS19P39019 145 aaKnown RBP14.27□□□□□ -0.13
SHMT2-225ENST00000556798 MOGAT2Q3SYC2 334 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 C9orf139Q6ZV77 190 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 ANKRD13BQ86YJ7 626 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 SIGLECL1Q8N7X8 197 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 OR4K15Q8NH41 348 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 UBALD1Q8TB05 177 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 SUCNR1Q9BXA5 334 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 NCOR1P1Q9H4R4 102 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 CALYQ9NYX4 217 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 SESN1Q9Y6P5 492 aa14.27□□□□□ -0.13
SHMT2-225ENST00000556798 A0A0U1RQK1 487 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 KBTBD11-OT1A0A1B0GTJ5 212 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 NPFFO15130 113 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 GLAP06280 429 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 CGB3P0DN86 165 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 CGB7P0DN87 165 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 RAB6AP20340 208 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 SAA4P35542 130 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 UBE2E1P51965 193 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 TMEM50BP56557 158 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 CTF1Q16619 201 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 LTC4SQ16873 150 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 DEFB112Q30KQ8 113 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 HEPN1Q6WQI6 88 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 ZNF565Q8N9K5 539 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 OR56B1Q8NGI3 324 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 OR5H6Q8NGV6 325 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 ARHGAP5-AS1Q96IT6 56 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 HEXA-AS1Q9H8Q6 139 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 PLEKHJ1Q9NW61 149 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
SHMT2-225ENST00000556798 MEIOCA2RUB1 952 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 IL1AP01583 271 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms