RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LYL1P12980 280 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF44P15621 663 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 SCN1BQ07699 218 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 MADCAM1Q13477 382 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 TP53I3Q53FA7 332 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 CXorf66Q5JRM2 361 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-221ENST00000556571 UTF1Q5T230 341 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 OR8H3Q8N146 312 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 DHRSXQ8N5I4 330 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF565Q8N9K5 539 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 HAVCR2Q8TDQ0 301 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 COQ2Q96H96 371 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 RHOFQ9HBH0 211 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 ING3Q9NXR8 418 aa9.33□□□□□ -0.92
ACTN1-221ENST00000556571 LCE6AA0A183 80 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 LOC107986453A0A1B0GWG9 222 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 LINC01548A6NM66 108 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 KDM4BO94953 1096 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 IGKV1D-33P01593 117 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 IGKV1-33P01594 117 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 UBCP0CG48 685 aaKnown RBP9.32□□□□□ -0.92
ACTN1-221ENST00000556571 CGB3P0DN86 165 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 CGB7P0DN87 165 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 ATF1P18846 271 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 GPR12P47775 334 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 INSL3P51460 131 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 RAB40BQ12829 278 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 FOXE3Q13461 319 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 GPR50Q13585 617 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 EBI3Q14213 229 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 DEFB136Q30KP8 78 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF260Q3ZCT1 412 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 Q6P435 159 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 TGIF2LXQ8IUE1 241 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 SPSB1Q96BD6 273 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 LGALS12Q96DT0 336 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 ADAT3Q96EY9 351 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-221ENST00000556571 RCHY1Q96PM5 261 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 AMBNQ9NP70 447 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 PALMDQ9NP74 551 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 AASSQ9UDR5 926 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
ACTN1-221ENST00000556571 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 IGKV1-12A0A0C4DH73 117 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 IRGMA1A4Y4 181 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 J3QLW9 94 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 SLC33A1O00400 549 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 CCRL2O00421 344 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 DEGS1O15121 323 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 IGKV1D-12P01611 117 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 IGHV3-7P01780 117 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 OCM2P0CE71 109 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF19P17023 458 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 GABRB1P18505 474 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 C21orf33P30042 268 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF85Q03923 595 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 MED21Q13503 144 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 DIAPH2-AS1Q14236 149 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 ATXN7L3Q14CW9 347 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 SLC16A12Q6ZSM3 486 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 RDH10Q8IZV5 341 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 PRSS35Q8N3Z0 413 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 OPALINQ96PE5 141 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 ALG8Q9BVK2 526 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 ABCG5Q9H222 651 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 LINC00574Q9H8X3 128 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 LIN7CQ9NUP9 197 aaKnown RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
ACTN1-221ENST00000556571 EXOGQ9Y2C4 368 aaKnown RBP9.31□□□□□ -0.92
ACTN1-221ENST00000556571 CASQ2O14958 399 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 RRP9O43818 475 aaKnown RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 LY86O95711 162 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 IL1AP01583 271 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 HTR1AP08908 422 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF20P17024 532 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 MYL12AP19105 171 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 CAPGP40121 348 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 GLP1RP43220 463 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 FHL3Q13643 280 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 GALEQ14376 348 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 OGFRL1Q5TC84 451 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF691Q5VV52 312 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 LHFPL3Q86UP9 236 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 SAXO1Q8IYX7 474 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 C8orf59Q8N0T1 100 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 OR51T1Q8NGJ9 327 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 OR10X1Q8NGY0 326 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 C4orf3Q8WVX3 66 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 LEAP2Q969E1 77 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 RFT1Q96AA3 541 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 FGGYQ96C11 551 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms