RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 YIPF3Q9GZM5 350 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 TMEM133Q9H2Q1 129 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 FN3KQ9H479 309 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 MAP6D1Q9H9H5 199 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 EFCAB1Q9HAE3 211 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 PEMTQ9UBM1 199 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR14J1Q9UGF5 321 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 SLC22A13Q9Y226 551 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 AP3M1Q9Y2T2 418 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 HSPE1-MOB4S4R3N1 261 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 TRBV4-1A0A0J9YWV2 114 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF701M0R085 212 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 FXYD1O00168 92 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 CXCR6O00574 342 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 HSPB6O14558 160 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 TOR1AO14656 332 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 FGF16O43320 207 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 SLC25A17O43808 307 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 NXPH2O95156 264 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 TNFAIP8O95379 198 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 BAG2O95816 211 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 IGHG2P01859 326 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 IFNA6P05013 189 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 FAM90A13PP0C7W8 464 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 FAM90A24PP0C7X0 464 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 PSKH1P11801 424 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 COX4I1P13073 169 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ATP6V1B1P15313 513 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 IFNGR2P38484 337 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 CEACAM3P40198 252 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 OPRL1P41146 370 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 PRRX1P54821 245 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 EDDM3BP56851 147 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 SMIM11AP58511 58 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ESRRGP62508 458 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 RIPPLY1Q0D2K3 151 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 CXorf66Q5JRM2 361 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 LCN1P1Q5VSP4 162 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 IZUMO2Q6UXV1 221 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 HACD2Q6Y1H2 254 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 MOB3CQ70IA8 216 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 SHFQ7M4L6 423 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 SLC35E3Q7Z769 313 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 PGAM4Q8N0Y7 254 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 STPG2Q8N412 459 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 LINC00471Q8N535 108 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 NRACQ8N912 160 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ASCC1Q8N9N2 400 aaKnown RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 OR52J3Q8NH60 311 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 FAM81AQ8TBF8 368 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF488Q96MN9 340 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 ABHD6Q9BV23 337 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 MRPS26Q9BYN8 205 aaKnown RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 NIPAL2Q9H841 368 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 GID8Q9NWU2 228 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 CHCHD3Q9NX63 227 aaKnown RBP3.75□□□□□ -1.81
ATXN3-239ENST00000556315 PTTG2Q9NZH5 202 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 DNAJC27Q9NZQ0 273 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 LINC00527Q9UJ94 153 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 POMPQ9Y244 141 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 POLDIP2Q9Y2S7 368 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 LINC00312Q9Y6C7 94 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
ATXN3-239ENST00000556315 MEX3AA1L020 520 aaKnown RBP3.74□□□□□ -1.81
ATXN3-239ENST00000556315 ACOD1A6NK06 481 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 BBIP1A8MTZ0 92 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 A8MZ25 164 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 LY6LH3BQJ8 138 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 BUB1B-PAK6H3BSN5 160 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 J3QT63 122 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF737O75373 536 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 MMP23AO75900 390 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SERPINA1P01009 418 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 IGLV1-47P01700 117 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 HCKP08631 526 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 H2BFMP0C1H6 154 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 GP9P14770 177 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SPNP16150 400 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 HAAOP46952 286 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-239ENST00000556315 GPR50Q13585 617 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 DEFB136Q30KP8 78 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF684Q5T5D7 378 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 TPTE2P1Q5T6R2 138 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SERTAD4-AS1Q5TG53 156 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SLX4IPQ5VYV7 408 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 RPL13AP3Q6NVV1 102 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SLC16A12Q6ZSM3 486 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 TCF23Q7RTU1 214 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SATL1Q86VE3 508 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 CROCCP3Q8IVE0 287 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 DEFB107AQ8IZN7 70 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 OR8H2Q8N162 312 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 FAM71E2Q8N5Q1 922 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 PACRGLQ8N7B6 248 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 C5orf56Q8N8D9 126 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 SLC37A3Q8NCC5 494 aa3.74□□□□□ -1.81
ATXN3-239ENST00000556315 OR11H1Q8NG94 326 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms