RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SLC35D2Q76EJ3 337 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 MRPL21Q7Z2W9 205 aaKnown RBP0.28□□□□□ -2.36
SNX6-204ENST00000555541 CTAGE6Q86UF2 777 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 KATNAL2Q8IYT4 538 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 PIH1D2Q8WWB5 315 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 TFGQ92734 400 aaPredicted RBP0.28□□□□□ -2.36
SNX6-204ENST00000555541 TIMM21Q9BVV7 248 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 TXNL4BQ9NX01 149 aaKnown RBP0.28□□□□□ -2.36
SNX6-204ENST00000555541 TRAV8-3A0A0A6YYJ7 113 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 RBFOX3A6NFN3 312 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 ARGFXA6NJG6 315 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 WRBO00258 174 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 ZNF593O00488 134 aaPredicted RBP0.27□□□□□ -2.37
SNX6-204ENST00000555541 CSKP41240 450 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 IFFO1Q0D2I5 559 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 IL18Q14116 193 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 SSX7Q7RTT5 188 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 OR4X2Q8NGF9 303 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 ZNRF2Q8NHG8 242 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 CHRNA10Q9GZZ6 450 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 ARAP3Q8WWN8 1544 aa0.27□□□□□ -2.37
SNX6-204ENST00000555541 POLEQ07864 2286 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 USP24Q9UPU5 2620 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 KMT2DO14686 5537 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 IGKV2-40A0A087WW87 121 aaPredicted RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 CCDC169A6NNP5 214 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 H3BP45 60 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 J3QQQ9 107 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 DENRO43583 198 aaKnown RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 GATCO43716 136 aaKnown RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 ALOX12BO75342 701 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 IGKV2D-40P01614 121 aaPredicted RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 IVDP26440 423 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 GPR4P46093 362 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 PLTPP55058 493 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 RPL26P61254 145 aaKnown RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 TSPAN31Q12999 210 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 ATP6V1FQ16864 119 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 CA13Q8N1Q1 262 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 COMMD1Q8N668 190 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 ZIC4Q8N9L1 334 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 PROKR2Q8NFJ6 384 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 GLYATL2Q8WU03 294 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 MRPS24Q96EL2 167 aaKnown RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 TAPBPLQ9BX59 468 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 BCL2L14Q9BZR8 327 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 SLC25A31Q9H0C2 315 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 RPL26L1Q9UNX3 145 aaKnown RBP0.26□□□□□ -2.37
SNX6-204ENST00000555541 MTCH2Q9Y6C9 303 aa0.26□□□□□ -2.37
SNX6-204ENST00000555541 ADAMTSL3P82987 1691 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 IGHV2-26A0A0B4J1V2 119 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 IGKV1-12A0A0C4DH73 117 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 SOD1P00441 154 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 IGKV1D-12P01611 117 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 NQO1P15559 274 aaKnown RBP0.25□□□□□ -2.37
SNX6-204ENST00000555541 LPAR6P43657 344 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 DUPD1Q68J44 220 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 C2orf91Q6ZV80 131 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 OR51Q1Q8NH59 317 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 GPX8Q8TED1 209 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 CLDN23Q96B33 292 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 MBOAT7Q96N66 472 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 PECRQ9BY49 303 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 SMDT1Q9H4I9 107 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 XKR8Q9H6D3 395 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 C8orf33Q9H7E9 229 aaPredicted RBP0.25□□□□□ -2.37
SNX6-204ENST00000555541 DDX18Q9NVP1 670 aaKnown RBP0.25□□□□□ -2.37
SNX6-204ENST00000555541 DNAJC27Q9NZQ0 273 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 ANGPT4Q9Y264 503 aa0.25□□□□□ -2.37
SNX6-204ENST00000555541 PTPRJQ12913 1337 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 BAZ2BQ9UIF8 2168 aaKnown RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 A0A1B0GVG6 124 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 ANKRD20A5PA0PJZ0 165 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 A8MUN3 132 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 TOR1AO14656 332 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 OR4A8P0C604 315 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 LIPCP11150 499 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 HINT1P49773 126 aaPredicted RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 PSMD4P55036 377 aaKnown RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 BEX3Q00994 111 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 DYNC1I2Q13409 638 aaKnown RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 UNQ6190/PRO20217Q6UXQ8 127 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 Q6ZTI0 123 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 CCDC121Q6ZUS5 278 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 ZNF283Q8N7M2 679 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 SPPL2BQ8TCT7 592 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 C16orf78Q8WTQ4 265 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 CASTOR1Q8WTX7 329 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 PDCD6IPQ8WUM4 868 aaKnown RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 RNF133Q8WVZ7 376 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 GTF2H4Q92759 462 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 GLT1D1Q96MS3 346 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 ZNF471Q9BX82 626 aaPredicted RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 NXF2Q9GZY0 626 aaKnown RBP0.24□□□□□ -2.37
SNX6-204ENST00000555541 C16orf95Q9H693 158 aa0.24□□□□□ -2.37
SNX6-204ENST00000555541 TRAV8-7A0A075B6U6 113 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 IGKV3D-7A0A0C4DH55 119 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 IGKV3OR2-268A0A0C4DH90 116 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 SEC14L6B5MCN3 397 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms