RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 OR4K2Q8NGD2 314 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 ERMNQ8TAM6 284 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 FAM57AQ8TBR7 257 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 LGALS14Q8TCE9 139 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 SMIM8Q96KF7 97 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 SPACA5Q96QH8 159 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 SHCBP1LQ9BZQ2 653 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 SND1-IT1Q9HBX3 110 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 C12orf4Q9NQ89 552 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 RBM22Q9NW64 420 aaKnown RBP eCLIP2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 DDIT4Q9NX09 232 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 DHCR7Q9UBM7 475 aaKnown RBP2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 ANXA10Q9UJ72 324 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 GPR179Q6PRD1 2367 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 MYH1P12882 1939 aa2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 USP9XQ93008 2570 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP1-201ENST00000555221 CLDN34H7C241 214 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 M0QZ92 97 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 UPK1AO00322 258 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 XIAPP98170 497 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 IGFBP7Q16270 282 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 ATP6AP1LQ52LC2 224 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 AADACL4Q5VUY2 407 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 KCTD16Q68DU8 428 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 FAHD1Q6P587 224 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 TBPL2Q6SJ96 375 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 DAZ4Q86SG3 579 aaKnown RBP2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 BLIDQ8IZY5 108 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR51Q1Q8NH59 317 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 PPTC7Q8NI37 304 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 ADTRPQ96IZ2 230 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 C8orf76Q96K31 380 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 DERL3Q96Q80 235 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 VAT1Q99536 393 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 CIB1Q99828 191 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 SEC22CQ9BRL7 303 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 RTBDNQ9BSG5 229 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 COPS4Q9BT78 406 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 TSGA10Q9BZW7 698 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 DHX35Q9H5Z1 703 aaKnown RBP2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 ABCB9Q9NP78 766 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 ACOT13Q9NPJ3 140 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 DAZ1Q9NQZ3 744 aaKnown RBP2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 NLE1Q9NVX2 485 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 STK38LQ9Y2H1 464 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 CEP290O15078 2479 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 NRCAMQ92823 1304 aa2.88□□□□□ -1.95
CKS1BP1-201ENST00000555221 RAB19A4D1S5 217 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 BOLA2-SMG1P6H3BVE0 249 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 CYTH3O43739 400 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZMPSTE24O75844 475 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR2A4O95047 310 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 IGKV1D-16P01601 117 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 RNASE2P10153 161 aaKnown RBP2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 HLA-DMAP28067 261 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 RANBP1P43487 201 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 ETV1P50549 477 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 MEF2CQ06413 473 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 LINC00303Q3SY05 128 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 RESP18Q5W5W9 173 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZFAND6Q6FIF0 208 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 SGPP2Q8IWX5 399 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 CYP4Z2PQ8N1L4 340 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF680Q8NEM1 530 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR5H2Q8NGV7 314 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 YIPF5Q969M3 257 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF396Q96N95 335 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 QKIQ96PU8 341 aaKnown RBP eCLIP2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR2A7Q96R45 310 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 HINT2Q9BX68 163 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 UPF3BQ9BZI7 483 aaKnown RBP2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 RAB1BQ9H0U4 201 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 RDH14Q9HBH5 336 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 PARP11Q9NR21 331 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 SDHAF3Q9NRP4 125 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 INIPQ9NRY2 104 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 CFAP45Q9UL16 551 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 INSIG2Q9Y5U4 225 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 SLC22A7Q9Y694 548 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 PTPN13Q12923 2485 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 CASP8AP2Q9UKL3 1982 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 MAST2Q6P0Q8 1798 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 NID2Q14112 1375 aa2.87□□□□□ -1.95
CKS1BP1-201ENST00000555221 DOCK2Q92608 1830 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 KIR2DS1A0A191URI9 304 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 UPK2O00526 184 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 SC5DO75845 299 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 NRASP01111 189 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 HRASP01112 189 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 KRASP01116 189 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 SNAP25P60880 206 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 MRPL2Q5T653 305 aaKnown RBP2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 RBM45Q8IUH3 476 aaKnown RBP2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 ATPAF2Q8N5M1 289 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZDHHC22Q8N966 263 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR1P1Q8NH06 330 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 UBA3Q8TBC4 463 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms