RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ACTG1P63261 375 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 MRPS15P82914 257 aaKnown RBP8.94□□□□□ -0.98
TDP1-211ENST00000555178 ZNF497Q6ZNH5 498 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 GDPD3Q7L5L3 318 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 MAPK1IP1LQ8NDC0 245 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 BEST4Q8NFU0 473 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 OR56B4Q8NH76 319 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 SDSLQ96GA7 329 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 POM121Q96HA1 1249 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 DLL4Q9NR61 685 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 KIF25Q9UIL4 384 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 CEACAM18A8MTB9 384 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 SDCBPO00560 298 aaPredicted RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 CA11O75493 328 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 TK1P04183 234 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 RBM39Q14498 530 aaKnown RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 ARL6IP1Q15041 203 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 RGS21Q2M5E4 152 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 STEAP1BQ6NZ63 245 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 C10orf105Q8TEF2 133 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 ZNF665Q9H7R5 613 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 FBXO9Q9UK97 447 aaPredicted RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 IGHV4-61A0A0C4DH41 118 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 VWC2LB2RUY7 222 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 ZNF736B4DX44 427 aaPredicted RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 K7N7A8 449 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 SIGLEC5O15389 551 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 ADAM20O43506 726 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 CSF1P09603 554 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 DNASE1P24855 282 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 GPR6P46095 362 aaPredicted RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 MRPS11P82912 194 aaKnown RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 KRBOX4Q5JUW0 171 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 FAM53AQ6NSI3 398 aaPredicted RBP8.93□□□□□ -0.98
TDP1-211ENST00000555178 ZNF841Q6ZN19 808 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 PRR18Q8N4B5 295 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 Q9N2K0 584 aa8.93□□□□□ -0.98
TDP1-211ENST00000555178 A0A1B0GVG6 124 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 SCTP09683 121 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 GSTT2P0CG29 244 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 GSTT2BP0CG30 244 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 NAT1P18440 290 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 DTYMKP23919 212 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 EDDM3BP56851 147 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 TAS2R19P59542 299 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 ERVFRD-1P60508 538 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 IL13RA1P78552 427 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 HERPUD1Q15011 391 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 IGSF11Q5DX21 431 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 ZNF561Q8N587 486 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 TMEM229BQ8NBD8 167 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 OR13A1Q8NGR1 328 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 SNX22Q96L94 193 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 SLC6A7Q99884 636 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 MMP28Q9H239 520 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 MEIKINA0A087WXM9 373 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 NKX6-3A6NJ46 265 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 PHF1O43189 567 aaPredicted RBP8.92□□□□□ -0.98
TDP1-211ENST00000555178 RAB3DO95716 219 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 ECDO95905 644 aaPredicted RBP8.92□□□□□ -0.98
TDP1-211ENST00000555178 CD74P04233 296 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 ZNF735P0CB33 412 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 AKAIN1P0CW23 69 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 GIFP27352 417 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 MDH2P40926 338 aaKnown RBP8.92□□□□□ -0.98
TDP1-211ENST00000555178 TMEM33P57088 247 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 DEFA1P59665 94 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 DEFA3P59666 94 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 CLEC12BQ2HXU8 276 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 SHEQ5VZ18 495 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 TCF23Q7RTU1 214 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 GAPTQ8N292 157 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 CENPSQ8N2Z9 138 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 OR51S1Q8NGJ8 323 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 CLDND2Q8NHS1 167 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 MRGPRDQ8TDS7 321 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 FAM168AQ92567 244 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 ANXA10Q9UJ72 324 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 TRAPPC2LQ9UL33 140 aa8.92□□□□□ -0.98
TDP1-211ENST00000555178 A0A096LNT2 108 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 IGKV1-6A0A0C4DH72 117 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 TMEM30CPA0ZSE6 113 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 DVL1O14640 695 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 AMY2AP04746 511 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 GLAP06280 429 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 WNT2P09544 360 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 NDUFB7P17568 137 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 SSTR5P35346 364 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 GLP1RP43220 463 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 CBX5P45973 191 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 PDLIM4P50479 330 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 LMO4P61968 165 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
TDP1-211ENST00000555178 DYRK1AQ13627 763 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 OXA1LQ15070 435 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 UTF1Q5T230 341 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 ATPAF1Q5TC12 328 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms