RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 RAB9AP51151 201 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 SGPP2Q8IWX5 399 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 RDH10Q8IZV5 341 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 OR51T1Q8NGJ9 327 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 OR5D18Q8NGL1 313 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 MRGPRDQ8TDS7 321 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 CASTOR1Q8WTX7 329 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 CMTM5Q96DZ9 223 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 ADAT3Q96EY9 351 aaPredicted RBP9.92□□□□□ -0.82
VPS29-211ENST00000553128 SPACA5Q96QH8 159 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 CNN2Q99439 309 aaKnown RBP9.92□□□□□ -0.82
VPS29-211ENST00000553128 OR51J1Q9H342 316 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 ZNF580Q9UK33 172 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 LY6G6CO95867 125 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 OR8U9P0C7N5 309 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 CNTFRP26992 372 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 SLC35F2Q8IXU6 374 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 HS3ST5Q8IZT8 346 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 DNAAF1Q8NEP3 725 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 PLPPR1Q8TBJ4 325 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 GIPC3Q8TF64 312 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 RTN4IP1Q8WWV3 396 aaPredicted RBP9.91□□□□□ -0.82
VPS29-211ENST00000553128 DDB2Q92466 427 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 NABP2Q9BQ15 211 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 TOLLIPQ9H0E2 274 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 GHITMQ9H3K2 345 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 TVP23BQ9NYZ1 205 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 ZNF107Q9UII5 783 aaPredicted RBP9.91□□□□□ -0.82
VPS29-211ENST00000553128 MYRFQ9Y2G1 1151 aa9.91□□□□□ -0.82
VPS29-211ENST00000553128 LOC107986453A0A1B0GWG9 222 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 FAM90A10PA6NDY2 464 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 M0R129 80 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 DEGS1O15121 323 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 HSPA12AO43301 675 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 SERPINA3P01011 423 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 OR5H8P0DN80 308 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 OSMP13725 252 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 ATF1P18846 271 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 CD1BP29016 333 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 HDXQ7Z353 690 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 PRSS35Q8N3Z0 413 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 ZNF565Q8N9K5 539 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 CHST4Q8NCG5 386 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 UBALD1Q8TB05 177 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 EME1Q96AY2 570 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 ADGRL4Q9HBW9 690 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 ACTR3BQ9P1U1 418 aa9.9□□□□□ -0.82
VPS29-211ENST00000553128 TNCP24821 2201 aa9.9□□□□□ -0.83
VPS29-211ENST00000553128 TRAV24A0A0B4J272 114 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 C12orf77C9JDV5 145 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 H0YJX3 145 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 PRKYO43930 277 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 SOX15O60248 233 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 C21orf33P30042 268 aaPredicted RBP9.89□□□□□ -0.83
VPS29-211ENST00000553128 PITPNAQ00169 270 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 RSBN1Q5VWQ0 802 aaPredicted RBP9.89□□□□□ -0.83
VPS29-211ENST00000553128 PGAM4Q8N0Y7 254 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 RPP25LQ8N5L8 163 aaKnown RBP9.89□□□□□ -0.83
VPS29-211ENST00000553128 YIPF7Q8N8F6 280 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 RITA1Q96K30 269 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 TBX5Q99593 518 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 SLC25A19Q9HC21 320 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 PARP11Q9NR21 331 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 ZNF581Q9P0T4 197 aa9.89□□□□□ -0.83
VPS29-211ENST00000553128 ZNF670-ZNF695F2Z2N8 137 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 SLC31A2O15432 143 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 SLC25A17O43808 307 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
VPS29-211ENST00000553128 PRKACGP22612 351 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 PRDX6P30041 224 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 VHLP40337 213 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 KIR3DL2P43630 455 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 ACTR3P61158 418 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 PAN3Q58A45 887 aaKnown RBP9.88□□□□□ -0.83
VPS29-211ENST00000553128 SLC16A12Q6ZSM3 486 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 MINDY2Q8NBR6 621 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 PP6455Q8WZ26 134 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
VPS29-211ENST00000553128 OPALINQ96PE5 141 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 RSRP1Q9BUV0 290 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 TMED9Q9BVK6 235 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 ZCCHC4Q9H5U6 513 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 MAGIXQ9H6Y5 334 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
VPS29-211ENST00000553128 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 IGHV3-43A0A0B4J1X8 118 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 TRAV41A0A0B4J266 112 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 BRI3O95415 125 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 IGHV3-43DP0DP04 118 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 BLVRBP30043 206 aaPredicted RBP9.87□□□□□ -0.83
VPS29-211ENST00000553128 NDPQ00604 133 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 GALEQ14376 348 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms