RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ESRP2Q9H6T0 727 aaKnown RBP8.26□□□□□ -1.09
TMEM116-216ENST00000552800 NCOR2Q9Y618 2525 aa8.26□□□□□ -1.09
TMEM116-216ENST00000552800 SPTA1P02549 2419 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 TRGV8A0A0C4DH27 118 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 FAM172BPA6NC97 362 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 CRYM-AS1A6NIL9 109 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ZSCAN5BA6NJL1 495 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 SHISA9B4DS77 424 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ATP6V1G2-DDX39BF2Z307 99 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 CCL21O00585 134 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 TNFRSF13BO14836 293 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 SSNA1O43805 119 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF737O75373 536 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 HAND1O96004 215 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 LOXP28300 417 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 H2BFSP57053 126 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ARPC4P59998 168 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 CYCSP99999 105 aaKnown RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 TAGLNQ01995 201 aaKnown RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 PPP1R1AQ13522 171 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 HMGN3Q15651 99 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ADIPOQQ15848 244 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 TEX36Q5VZQ5 186 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 SHISA2Q6UWI4 295 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 SLC38A6Q8IZM9 456 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 GCSAMQ8N6F7 178 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 GALNT11Q8NCW6 608 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 OR5M8Q8NGP6 311 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 CAPSLQ8WWF8 208 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 DYRK2Q92630 601 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 LURAP1Q96LR2 239 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 PHB2Q99623 299 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 VRK1Q99986 396 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF2Q9BSG1 426 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-216ENST00000552800 LINC00574Q9H8X3 128 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 MSL2Q9HCI7 577 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 COQ3Q9NZJ6 369 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 IL36RNQ9UBH0 155 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 NDRG3Q9UGV2 375 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF222Q9UK12 451 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 HCFC1P51610 2035 aa8.25□□□□□ -1.09
TMEM116-216ENST00000552800 CACNA1DQ01668 2161 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 PIGBOS1A0A0B4J2F0 54 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 IGKV1-6A0A0C4DH72 117 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 MED19A0JLT2 244 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 C17orf100A8MU93 164 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SDCBPO00560 298 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SLC22A5O76082 557 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 NXPH2O95156 264 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 IGHV1-46P01743 117 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 TK1P04183 234 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 GRPP07492 148 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 CGB3P0DN86 165 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 CGB7P0DN87 165 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SLC25A4P12235 298 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 LYL1P12980 280 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 APOBEC3AP31941 199 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF81P51508 661 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 IFITM2Q01629 132 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 BSPH1Q075Z2 132 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 FGL1Q08830 312 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 HERPUD1Q15011 391 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 C2orf68Q2NKX9 166 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 MST1LQ2TV78 715 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SMIM21Q3B7S5 101 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 C4orf46Q504U0 113 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ESCO2Q56NI9 601 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 C11orf88Q6PI97 169 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 TRAT1Q6PIZ9 186 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 C17orf107Q6ZR85 190 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 H1FOOQ8IZA3 346 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ADAD2Q8NCV1 583 aaKnown RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 OR11H4Q8NGC9 324 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SDSLQ96GA7 329 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SNX22Q96L94 193 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF488Q96MN9 340 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 SYT3Q9BQG1 590 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 NMES1Q9C002 83 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 FAM234AQ9H0X4 552 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 GCM1Q9NP62 436 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 FAM212BQ9NTI7 297 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF701Q9NV72 531 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 TAAR3PQ9P1P4 343 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ZNF69Q9UC07 566 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 DUSP13Q9UII6 198 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ERRFI1Q9UJM3 462 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-216ENST00000552800 ZZEF1O43149 2961 aa8.24□□□□□ -1.09
TMEM116-216ENST00000552800 RFPL4AA6NLU0 287 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 RFPL4AL1F8VTS6 287 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 K7N7A8 449 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 ABCD4O14678 606 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 PSPNO60542 156 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 PPYP01298 95 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 HLA-AP01891 365 aaKnown RBP8.23□□□□□ -1.09
TMEM116-216ENST00000552800 PSG2P11465 335 aa8.23□□□□□ -1.09
TMEM116-216ENST00000552800 MUC1P15941 1255 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms