RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 XIAPP98170 497 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 CD164Q04900 197 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 PRDX1Q06830 199 aaKnown RBP1.31□□□□□ -2.2
SCAF11-215ENST00000551391 TRAM1Q15629 374 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 TRIP13Q15645 432 aaPredicted RBP1.31□□□□□ -2.2
SCAF11-215ENST00000551391 RBM45Q8IUH3 476 aaKnown RBP1.31□□□□□ -2.2
SCAF11-215ENST00000551391 C10orf107Q8IVU9 208 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 OR2AE1Q8NHA4 323 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 OR2V1Q8NHB1 315 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 LMX1AQ8TE12 382 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 TSSK6Q9BXA6 273 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 EBPLQ9BY08 206 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 ARL6Q9H0F7 186 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 ALX4Q9H161 411 aaPredicted RBP1.31□□□□□ -2.2
SCAF11-215ENST00000551391 TUBA4BQ9H853 241 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 SLC23A2Q9UGH3 650 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 VPREB3Q9UKI3 123 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 POMPQ9Y244 141 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 RBMX2Q9Y388 322 aaKnown RBP1.31□□□□□ -2.2
SCAF11-215ENST00000551391 PHLDA3Q9Y5J5 127 aa1.31□□□□□ -2.2
SCAF11-215ENST00000551391 VWDEQ8N2E2 1590 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 A0A1W2PRG6 482 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 RAB19A4D1S5 217 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 CRXO43186 299 aaPredicted RBP1.3□□□□□ -2.2
SCAF11-215ENST00000551391 IVLP07476 585 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 CCDC172P0C7W6 258 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 GZMHP20718 246 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 PYCR1P32322 319 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 COILP38432 576 aaPredicted RBP1.3□□□□□ -2.2
SCAF11-215ENST00000551391 INPP1P49441 399 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 PSG3Q16557 428 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 NOXRED1Q6NXP6 359 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 SCXQ7RTU7 201 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 PDCL2Q8N4E4 241 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 OR4A5Q8NH83 315 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 LRRC20Q8TCA0 184 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 DTD1Q8TEA8 209 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.3□□□□□ -2.2
SCAF11-215ENST00000551391 HIST1H2BAQ96A08 127 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 LRRC39Q96DD0 335 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 MSANTD3Q96H12 275 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 GOLPH3Q9H4A6 298 aa1.3□□□□□ -2.2
SCAF11-215ENST00000551391 TBL2Q9Y4P3 447 aaKnown RBP1.3□□□□□ -2.2
SCAF11-215ENST00000551391 KMT2EQ8IZD2 1858 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 TRAV8-2A0A0B4J237 113 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 NDUFS8O00217 210 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 PSMD11O00231 422 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 TP53I11O14683 189 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 OR12D1P0DN82 309 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 ZNF3P17036 446 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 S100A2P29034 98 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 UGT2B10P36537 528 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 PSG4Q00888 419 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 DGAT2L6Q6ZPD8 337 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 ZNF767PQ75MW2 155 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 SSX7Q7RTT5 188 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 OLIG3Q7RTU3 272 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 MRPL52Q86TS9 123 aaKnown RBP1.29□□□□□ -2.2
SCAF11-215ENST00000551391 MSRB3Q8IXL7 192 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 ZNF567Q8N184 647 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 CDRT4Q8N9R6 151 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 GATD1Q8NB37 220 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 OR11G2Q8NGC1 345 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 OR4K13Q8NH42 304 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 TMEM239Q8WW34 195 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 GTF2H4Q92759 462 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 MAT2BQ9NZL9 334 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 NXT1Q9UKK6 140 aaKnown RBP1.29□□□□□ -2.2
SCAF11-215ENST00000551391 BTRCQ9Y297 605 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 URGCP-MRPS24S4R325 110 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 HSPE1-MOB4S4R3N1 261 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 SHANK3Q9BYB0 1731 aa1.29□□□□□ -2.2
SCAF11-215ENST00000551391 AK9Q5TCS8 1911 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 TRGV4A0A0C4DH28 118 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 C17orf98A8MV24 154 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 F8VP50 259 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 KLRC4-KLRK1H3BQV0 150 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 FGF16O43320 207 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 EEF1E1O43324 174 aaKnown RBP1.28□□□□□ -2.2
SCAF11-215ENST00000551391 DENRO43583 198 aaKnown RBP1.28□□□□□ -2.2
SCAF11-215ENST00000551391 CST4P01036 141 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 LTAP01374 205 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 CCL2P13500 99 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 SPNP16150 400 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 MAGEA3P43357 314 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 HSPA13P48723 471 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 KRTAP12-1P59990 96 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 DEFB103AP81534 67 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 APOFQ13790 326 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 BSXQ3C1V8 233 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 NIPAL1Q6NVV3 410 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 OR10P1Q8NGE3 313 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 FAM45AQ8TCE6 357 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 SPPL2BQ8TCT7 592 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 CD200R1Q8TD46 325 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 GPR119Q8TDV5 335 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 OR5P2Q8WZ92 322 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 PRSS27Q9BQR3 290 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 BCL2L14Q9BZR8 327 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 LRRC19Q9H756 370 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms