RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 RNASEK-C17orf49H0YIS7 233 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 IGHV1-69P01742 117 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 CHATP28329 748 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 VBP1P61758 197 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 PAX5Q02548 391 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 PLA2G7Q13093 441 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 KLRD1Q13241 179 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 NCR3LG1Q68D85 454 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 BRD3OSQ6XYD6 125 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 ZNF782Q6ZMW2 699 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 PRIMA1Q86XR5 153 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 ANKRD13BQ86YJ7 626 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 FAM89BQ8N5H3 189 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 ZNF565Q8N9K5 539 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 NAA50Q9GZZ1 169 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 HEXA-AS1Q9H8Q6 139 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 SOCS1O15524 211 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 RBP4P02753 201 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 RPS19P39019 145 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 GLP1RP43220 463 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 SERPINB10P48595 397 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 VEGFCP49767 419 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 EFNB2P52799 333 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 BPIFB3P59826 476 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 NCS1P62166 190 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 GUCA2AQ02747 115 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 IDNKQ5T6J7 187 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 C6orf201Q7Z4U5 140 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 BCL6BQ8N143 479 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 OR56B1Q8NGI3 324 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 OR13A1Q8NGR1 328 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 FAAP24Q9BTP7 215 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 GAL3ST2Q9H3Q3 398 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 PLEKHJ1Q9NW61 149 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 SCOCQ9UIL1 159 aa13.28□□□□□ -0.28
CHMP1A-209ENST00000550872 TRAV39A0A0B4J263 110 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 ZNF729A6NN14 1252 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 CA11O75493 328 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 IL1AP01583 271 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 MT-ND4P03905 459 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 IGHV1-8P0DP01 117 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 RAB6AP20340 208 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 FAM189A2Q15884 450 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 ZNF497Q6ZNH5 498 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 SLC16A12Q6ZSM3 486 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 MRGPRDQ8TDS7 321 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 CCDC107Q8WV48 283 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 DYRK2Q92630 601 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 CYYR1Q96J86 154 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 SLC6A7Q99884 636 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 SULT4A1Q9BR01 284 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 STAB1Q9NY15 2570 aa13.27□□□□□ -0.29
CHMP1A-209ENST00000550872 METTL21EPA6NDL7 271 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 MMP23AO75900 390 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CLPXO76031 633 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 GABARAPO95166 117 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 PAHP00439 452 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CGB3P0DN86 165 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CGB7P0DN87 165 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 GZMHP20718 246 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 COX7A1P24310 79 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CDK2P24941 298 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 UBE2E1P51965 193 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 TMEM50BP56557 158 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 PRAMEF5Q5TYX0 476 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 HCP5Q6MZN7 132 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 Q6ZTK2 550 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 C9orf139Q6ZV77 190 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 PNKDQ8N490 385 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 OR4K15Q8NH41 348 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 ZNF418Q8TF45 676 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 PTX4Q96A99 478 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 CALYQ9NYX4 217 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 SESN1Q9Y6P5 492 aa13.26□□□□□ -0.29
CHMP1A-209ENST00000550872 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 NPFFO15130 113 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 OMGP23515 440 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 CTF1Q16619 201 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 C17orf58Q2M2W7 97 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 HEPN1Q6WQI6 88 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 CLVS1Q8IUQ0 354 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 OR13D1Q8NGV5 346 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 LGALS14Q8TCE9 139 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 MDFIQ99750 246 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 SUCNR1Q9BXA5 334 aa13.25□□□□□ -0.29
CHMP1A-209ENST00000550872 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms