RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MRPL41Q8IXM3 137 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 ACBD7Q8N6N7 88 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR51A4Q8NGJ6 313 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR5D18Q8NGL1 313 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR13C9Q8NGT0 318 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR10AC1Q8NH08 325 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR56B4Q8NH76 319 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 TOMM40LQ969M1 308 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 RPEQ96AT9 228 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 RNFT2Q96EX2 444 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 CPNE2Q96FN4 548 aaPredicted RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 MRPL48Q96GC5 212 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 CENPNQ96H22 339 aaPredicted RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 C20orf173Q96LM9 149 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 SPACA5Q96QH8 159 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 MYCBPQ99417 103 aaPredicted RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 MCRIP2Q9BUT9 160 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 PPIL3Q9H2H8 161 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 ZCCHC4Q9H5U6 513 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 LINC00574Q9H8X3 128 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 ZFP57Q9NU63 452 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 MYRFQ9Y2G1 1151 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 MEIKINA0A087WXM9 373 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 A0A1W2PPI3 338 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 WI2-2373I1.2A0A1W2PRP0 233 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SH2D7A6NKC9 451 aaPredicted RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 NPIPB11E5RHQ5 1161 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 H0YJX3 145 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 J3QLW9 94 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 J3QR06 171 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SULT1B1O43704 296 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 IL1AP01583 271 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SNRNP70P08621 437 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 HCKP08631 526 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 TMEM225BP0DP42 221 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 ZNF19P17023 458 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 HOXA5P20719 270 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 NFYBP25208 207 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 C21orf33P30042 268 aaPredicted RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 GLP1RP43220 463 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 KCNJ3P48549 501 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 THBS3P49746 956 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SNRPGP62308 76 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 RPL23AP62750 156 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 SCN1BQ07699 218 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 MRPL28Q13084 256 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 MADCAM1Q13477 382 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 ETV3LQ6ZN32 361 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SLC16A12Q6ZSM3 486 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 OR2W3Q7Z3T1 314 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 RNF144BQ7Z419 303 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 OR8H3Q8N146 312 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 SYS1Q8N2H4 156 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 PARP16Q8N5Y8 322 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 COMMD1Q8N668 190 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 C5orf56Q8N8D9 126 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 PXT1Q8NFP0 134 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 OR10A7Q8NGE5 316 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 OR5D14Q8NGL3 314 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 HAVCR2Q8TDQ0 301 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 CHPT1Q8WUD6 406 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 PELI1Q96FA3 418 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 HRASLS5Q96KN8 279 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 C4orf36Q96KX1 117 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 B9D2Q9BPU9 175 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 BARHL1Q9BZE3 327 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 ING3Q9NXR8 418 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 CALYQ9NYX4 217 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 IDI2-AS1Q9NZ38 188 aa6.03□□□□□ -1.44
NEK3-201ENST00000550331 ZMAT5Q9UDW3 170 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 EXOGQ9Y2C4 368 aaKnown RBP6.03□□□□□ -1.44
NEK3-201ENST00000550331 TRAV24A0A0B4J272 114 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 SAC3D1A6NKF1 404 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 TMEM212A6NML5 194 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ATP5HO75947 161 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ZFPL1O95159 310 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ALPLP05186 524 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 CCDC159P0C7I6 412 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 TMEM11P17152 192 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 HOXD3P31249 432 aaPredicted RBP6.02□□□□□ -1.45
NEK3-201ENST00000550331 MYCNOSP40205 109 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 SLC35B1P78383 322 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 GALEQ14376 348 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 IL13RA2Q14627 380 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 PAN3Q58A45 887 aaKnown RBP6.02□□□□□ -1.45
NEK3-201ENST00000550331 UTF1Q5T230 341 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ZNF691Q5VV52 312 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 RSBN1Q5VWQ0 802 aaPredicted RBP6.02□□□□□ -1.45
NEK3-201ENST00000550331 ZNF329Q86UD4 541 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 FOXRED2Q8IWF2 684 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 DRAM1Q8N682 238 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 Q8NFD4 153 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 OR13A1Q8NGR1 328 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 CNIH3Q8TBE1 160 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 P2RX4Q99571 388 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ALG8Q9BVK2 526 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 KIF25Q9UIL4 384 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 PSG11Q9UQ72 335 aa6.02□□□□□ -1.45
NEK3-201ENST00000550331 ORC6Q9Y5N6 252 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms