RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TMEM104Q8NE00 496 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 OR5R1Q8NH85 324 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 KCNG3Q8TAE7 436 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 PLPPR1Q8TBJ4 325 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 FAM46BQ96A09 425 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 CLEC7AQ9BXN2 247 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 RCC2Q9P258 522 aaKnown RBP21.12■□□□□ 0.97
CPSF6-205ENST00000550075 TMEM89A2RUT3 159 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 ODF3BA8MYP8 253 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 MCRIP1C9JLW8 97 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 BPNT1O95861 308 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 MPIG6BO95866 241 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 RPL15P61313 204 aaKnown RBP21.11■□□□□ 0.97
CPSF6-205ENST00000550075 SLC35E4Q6ICL7 350 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 RAB12Q6IQ22 244 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 CD200R1LQ6Q8B3 271 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 TMEM59Q9BXS4 323 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 CHIAQ9BZP6 476 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 ZNF581Q9P0T4 197 aa21.11■□□□□ 0.97
CPSF6-205ENST00000550075 IGHV2-26A0A0B4J1V2 119 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 KBTBD11-OT1A0A1B0GTJ5 212 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 TRDV1A0A1B0GX56 115 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 SLC17A2O00624 439 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 PDCD5O14737 125 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 CRYBA1P05813 215 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 HKR1P10072 659 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 CD37P11049 281 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 C12orf54Q6X4T0 127 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 RTN4RL2Q86UN3 420 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 DYRK2Q92630 601 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 CALYQ9NYX4 217 aa21.1■□□□□ 0.97
CPSF6-205ENST00000550075 AK6Q9Y3D8 172 aaKnown RBP21.1■□□□□ 0.97
CPSF6-205ENST00000550075 GLAP06280 429 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 FUT3P21217 361 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 FOXL1Q12952 345 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 RAB11BQ15907 218 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 AANATQ16613 207 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 OR13A1Q8NGR1 328 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 PEX16Q9Y5Y5 336 aa21.09■□□□□ 0.97
CPSF6-205ENST00000550075 TRAV1-2A0A0B4J238 106 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 PDCD6O75340 191 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 CA11O75493 328 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 TNFAIP8O95379 198 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 IL1AP01583 271 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 VSIG8P0DPA2 414 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 LRRC75BQ2VPJ9 315 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 MINOS1Q5TGZ0 78 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 GDPGP1Q6ZNW5 385 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 ZNF596Q8TC21 504 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 MRGPRDQ8TDS7 321 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 MEGF9Q9H1U4 602 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 ETAA1Q9NY74 926 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 VPREB3Q9UKI3 123 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 MINOS1-NBL1R4GNA1 71 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 V9GY05 133 aa21.08■□□□□ 0.97
CPSF6-205ENST00000550075 MMP23AO75900 390 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 ARSBP15848 533 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 OMGP23515 440 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 COMPP49747 757 aaPredicted RBP21.07■□□□□ 0.96
CPSF6-205ENST00000550075 RPS27AP62979 156 aaKnown RBP21.07■□□□□ 0.96
CPSF6-205ENST00000550075 C17orf58Q2M2W7 97 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 ZNF497Q6ZNH5 498 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 OR2W3Q7Z3T1 314 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 NDNFQ8TB73 568 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 VCX3AQ9NNX9 186 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 RAB9BQ9NP90 201 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 STUB1Q9UNE7 303 aa21.07■□□□□ 0.96
CPSF6-205ENST00000550075 FAM181BA6NEQ2 426 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 AIPO00170 330 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 GPR137BO60478 399 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 GZMHP20718 246 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 CD34P28906 385 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 P2RY14Q15391 338 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 NEDD8Q15843 81 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 LHFPL4Q7Z7J7 247 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 ABHD12Q8N2K0 398 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 OR10A7Q8NGE5 316 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 C17orf50Q8WW18 174 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 MALSU1Q96EH3 234 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 NEDD4LQ96PU5 975 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 GFI1Q99684 422 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 SSX3Q99909 188 aa21.06■□□□□ 0.96
CPSF6-205ENST00000550075 URM1Q9BTM9 101 aaKnown RBP21.06■□□□□ 0.96
CPSF6-205ENST00000550075 TMEM14DPA8MWL7 114 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 TOR1AO14656 332 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 NFYBP25208 207 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 C22orf42Q6IC83 251 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 OR10K2Q6IF99 312 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 BRICD5Q6PL45 260 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 AJUBAQ96IF1 538 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 KIRREL1Q96J84 757 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 LINC00574Q9H8X3 128 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 IDI2-AS1Q9NZ38 188 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 SSR3Q9UNL2 185 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 DNHD1Q96M86 4753 aa21.05■□□□□ 0.96
CPSF6-205ENST00000550075 H3BUX3 64 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 CGB3P0DN86 165 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 CGB7P0DN87 165 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 HTR1DP28221 377 aa21.04■□□□□ 0.96
CPSF6-205ENST00000550075 FGF9P31371 208 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms