RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 UMAD1C9J7I0 102 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 TRIM77I1YAP6 450 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 HS3ST1O14792 307 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 PGLYRP1O75594 196 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 CEACAM4O75871 244 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SCO1O75880 301 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 TSPAN15O95858 294 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 PGA5P0DJD9 388 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 F2RP25116 425 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 CAV2P51636 162 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 ERVK11-1P61568 191 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 BTN1A1Q13410 526 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF146Q15072 292 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 PEA15Q15121 130 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 MSMO1Q15800 293 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF718Q3SXZ3 478 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 PXDC1Q5TGL8 231 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 TRAT1Q6PIZ9 186 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 BEND4Q6ZU67 534 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 TMPRSS7Q7RTY8 843 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SELENOHQ8IZQ5 122 aaKnown RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 OR2C3Q8N628 320 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SCCPDHQ8NBX0 429 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 OR8G5Q8NG78 346 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 OR10V1Q8NGI7 309 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 OR11L1Q8NGX0 322 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 RNASE11Q8TAA1 199 aaKnown RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 LHFPL5Q8TAF8 219 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SLC25A40Q8TBP6 338 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 FAM216AQ8WUB2 273 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 RDH5Q92781 318 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 GINS3Q9BRX5 216 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 PBDC1Q9BVG4 233 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 C1QTNF6Q9BXI9 259 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 SEC11CQ9BY50 192 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 NKX6-2Q9C056 277 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 OR2J1Q9GZK6 312 aa7.62□□□□□ -1.19
TMEM116-209ENST00000550020 LIN7CQ9NUP9 197 aaKnown RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 RCL1Q9Y2P8 373 aaKnown RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 CARHSP1Q9Y2V2 147 aaKnown RBP7.62□□□□□ -1.19
TMEM116-209ENST00000550020 NCKAP5O14513 1909 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 F8W036 122 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 HSPB6O14558 160 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 HSD17B6O14756 317 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 TSPAN4O14817 238 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 KCNAB3O43448 404 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 PITX3O75364 302 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 LYZL6O75951 148 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 DFFBO76075 338 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 OR2H2O95918 312 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 IGKV3-15P01624 115 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 CRYABP02511 175 aaKnown RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 CEACAM1P13688 526 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 KITLGP21583 273 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 DVL1P1P54792 670 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 RAB2AP61019 212 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 RPL23AP62750 156 aaKnown RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 DAZAP2Q15038 168 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 TSC22D1Q15714 1073 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 DEFB109BQ30KR1 87 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 C3orf36Q3SXR2 165 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 ACSF3Q4G176 576 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 SPATA46Q5T0L3 261 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF324BQ6AW86 544 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 Q6P435 159 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 IGFL3Q6UXB1 125 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF497Q6ZNH5 498 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF818PQ6ZRF7 136 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 TCTEX1D1Q8N7M0 179 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 LSM10Q969L4 123 aaKnown RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 RAB40CQ96S21 281 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 OR51B6Q9H340 312 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 HRH4Q9H3N8 390 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 SMDT1Q9H4I9 107 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 PARD6AQ9NPB6 346 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 CCL28Q9NRJ3 127 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 PURGQ9UJV8 347 aaKnown RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 WIPI2Q9Y4P8 454 aa7.61□□□□□ -1.19
TMEM116-209ENST00000550020 RBM7Q9Y580 266 aaKnown RBP7.61□□□□□ -1.19
TMEM116-209ENST00000550020 NCOA6Q14686 2063 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 NKX2-6A6NCS4 301 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 BTBD17A6NE02 478 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 RNASEK-C17orf49H0YIS7 233 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 IFNL4K9M1U5 179 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SLC33A1O00400 549 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 ADAM20O43506 726 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 TIMM8AO60220 97 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 FBXO24O75426 580 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 HAND1O96004 215 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 PRH1P02810 166 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 DANCRP0C864 163 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SPP1P10451 314 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 KIR2DL2P43627 348 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 CAMLGP49069 296 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 PMP22Q01453 160 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms