RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PNKDQ8N490 385 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 JMJD8Q96S16 334 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 NCOR1P1Q9H4R4 102 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 ETAA1Q9NY74 926 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 RCC2Q9P258 522 aaKnown RBP13.76□□□□□ -0.21
LTBR-215ENST00000546296 UBE2QL1A1L167 161 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 AIPO00170 330 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 GLAP06280 429 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 LSM3P62310 102 aaKnown RBP13.75□□□□□ -0.21
LTBR-215ENST00000546296 DEFB112Q30KQ8 113 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 USP43Q70EL4 1123 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 CCDC107Q8WV48 283 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 TM2D1Q9BX74 207 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 SESN1Q9Y6P5 492 aa13.75□□□□□ -0.21
LTBR-215ENST00000546296 TRAV39A0A0B4J263 110 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 TMEM272A0A1B0GTI8 110 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 MEIOCA2RUB1 952 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 ZNF729A6NN14 1252 aaPredicted RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 CLPXO76031 633 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 SLC2A2P11168 524 aaPredicted RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 CDK2P24941 298 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 BLVRBP30043 206 aaPredicted RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 LGALS4P56470 323 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 PAX5Q02548 391 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 BAMBIQ13145 260 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 DYNC1I2Q13409 638 aaKnown RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 PRAMEF5Q5TYX0 476 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 SIGIRRQ6IA17 410 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 HCP5Q6MZN7 132 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 ZNF497Q6ZNH5 498 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 OR13A1Q8NGR1 328 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
LTBR-215ENST00000546296 NICN1Q9BSH3 213 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 LPAR5Q9H1C0 372 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 LIN7BQ9HAP6 207 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 FBLN5Q9UBX5 448 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
LTBR-215ENST00000546296 A0A0B4J203 849 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 KBTBD11-OT1A0A1B0GTJ5 212 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 PAHP00439 452 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 MT-ND4P03905 459 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 CLEC2LP0C7M8 214 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 GZMHP20718 246 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 OMGP23515 440 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 HILS1P60008 231 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 OR52W1Q6IF63 320 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 HEPN1Q6WQI6 88 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 OR13F1Q8NGS4 319 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 FAAP24Q9BTP7 215 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 FUNDC2Q9BWH2 189 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 TMEM133Q9H2Q1 129 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 PLEKHJ1Q9NW61 149 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 CALYQ9NYX4 217 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 TRAPPC2LQ9UL33 140 aa13.73□□□□□ -0.21
LTBR-215ENST00000546296 A0A0A6YYD4 124 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 LDLRAD4O15165 306 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 SOCS1O15524 211 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 CA11O75493 328 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 MMP23AO75900 390 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 VENTXO95231 258 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 ARG1P05089 322 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 NFYBP25208 207 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 CFPP27918 469 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 CHATP28329 748 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 SAA4P35542 130 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 VEGFCP49767 419 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 FAM189A2Q15884 450 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 C17orf58Q2M2W7 97 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 MIDNQ504T8 468 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 C6orf201Q7Z4U5 140 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 OR56B1Q8NGI3 324 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 RFESDQ8TAC1 157 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 DYRK2Q92630 601 aa13.72□□□□□ -0.21
LTBR-215ENST00000546296 FBP1P09467 338 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 CGB3P0DN86 165 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 CGB7P0DN87 165 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 PLA2G7Q13093 441 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 LTC4SQ16873 150 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 FAM89BQ8N5H3 189 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 OR4K15Q8NH41 348 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 SULT4A1Q9BR01 284 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 CLEC7AQ9BXN2 247 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 CHMP1AQ9HD42 196 aaPredicted RBP13.71□□□□□ -0.21
LTBR-215ENST00000546296 IDI2-AS1Q9NZ38 188 aa13.71□□□□□ -0.21
LTBR-215ENST00000546296 IGHV2-26A0A0B4J1V2 119 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 FAM172BPA6NC97 362 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 METTL21EPA6NDL7 271 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 TRIM77I1YAP6 450 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 TOR1AO14656 332 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 IL1AP01583 271 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms