RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 NOS1APO75052 506 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 IGHG4P01861 327 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 PSMB8P28062 276 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 CEACAM3P40198 252 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 RBM48Q5RL73 367 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 RTN4RL2Q86UN3 420 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 OR8H2Q8N162 312 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 OR5A2Q8NGI9 324 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 TMEM80Q96HE8 168 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 TMED9Q9BVK6 235 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 RGCCQ9H4X1 137 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 MOB1AQ9H8S9 216 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 IKZF2Q9UKS7 526 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 EXOSC1Q9Y3B2 195 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
CLSTN3-216ENST00000545663 A0A1W2PQL4 384 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 METTL15A6NJ78 407 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 F8VVB4 439 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 F8VWA3 439 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 J3QRE1 110 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 TOR1AO14656 332 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 IGHA1P01876 353 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 CDK2P24941 298 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 HAAOP46952 286 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 TMPRSS11AQ6ZMR5 421 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 SYS1Q8N2H4 156 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 BPIFB6Q8NFQ5 453 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 OR52N4Q8NGI2 321 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 MYOZ3Q8TDC0 251 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 AMBNQ9NP70 447 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 PSORS1C1Q9UIG5 152 aa11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 DIMT1Q9UNQ2 313 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-216ENST00000545663 CXorf65A6NEN9 183 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 OR5B21A6NL26 309 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 MRPS14O60783 128 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 PSMA6P60900 246 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 GALEQ14376 348 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 PLCXD3Q63HM9 321 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 STX19Q8N4C7 294 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 ZNF491Q8N8L2 437 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 TUBA4BQ9H853 241 aa11.82□□□□□ -0.52
CLSTN3-216ENST00000545663 TMEM269A0A1B0GVZ9 245 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 A0A1W2PPI3 338 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 NCBP2LA6PVI3 153 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 J3QT63 122 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 ERVK11-1P61568 191 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 RUNX1Q01196 453 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 ST3GAL4Q11206 333 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 SMN1Q16637 294 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 YIPF7Q8N8F6 280 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 TOMM40LQ969M1 308 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 ABCG5Q9H222 651 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 GHITMQ9H3K2 345 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 AASSQ9UDR5 926 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 COPS3Q9UNS2 423 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 ERGIC3Q9Y282 383 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 LRRC42Q9Y546 428 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 SNX5Q9Y5X3 404 aa11.81□□□□□ -0.52
CLSTN3-216ENST00000545663 OOSP1A8MZH6 123 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 HSPA12AO43301 675 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 HCCSP53701 268 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 GRK1Q15835 563 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 KRT74Q7RTS7 529 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 ANGPTL5Q86XS5 388 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 CCDC54Q8NEL0 328 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 GGHQ92820 318 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 RPEQ96AT9 228 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 CREB3L1Q96BA8 519 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 SNX22Q96L94 193 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 KCTD7Q96MP8 289 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 TBX5Q99593 518 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 HSPB9Q9BQS6 159 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 ALG8Q9BVK2 526 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 FKBP14Q9NWM8 211 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 UBE2J1Q9Y385 318 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 R4GMQ9 66 aa11.8□□□□□ -0.52
CLSTN3-216ENST00000545663 DNAH11Q96DT5 4516 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 A0A0U1RQV5 110 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 LOC110117498-PIK3R3F6TDL0 507 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 INMTO95050 263 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms