RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PPIHO43447 177 aaKnown RBP13.2□□□□□ -0.3
CNOT9-208ENST00000542068 TMEM50AO95807 157 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF16P17020 682 aaPredicted RBP13.2□□□□□ -0.3
CNOT9-208ENST00000542068 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 CYB561P49447 251 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 DPPA2Q7Z7J5 298 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 MUCL1Q96DR8 90 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 FOXB1Q99853 325 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 CCL28Q9NRJ3 127 aa13.2□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF587BE7ETH6 402 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
CNOT9-208ENST00000542068 HSPA12AO43301 675 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 FABP4P15090 132 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 TUBG1P23258 451 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-208ENST00000542068 PLGLB1Q02325 96 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 SPSB3Q6PJ21 355 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 FADS6Q8N9I5 356 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF610Q8N9Z0 462 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 GAR1Q9NY12 217 aaKnown RBP13.19□□□□□ -0.3
CNOT9-208ENST00000542068 LOXL2Q9Y4K0 774 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 IGKV1D-13A0A0B4J2D9 117 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 VAMP5O95183 116 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 CELA3AP09093 270 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 IGKV1-13P0DP09 117 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 FGF5P12034 268 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF266Q14584 549 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 SLC25A53Q5H9E4 307 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF818PQ6ZRF7 136 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 ZIC4Q8N9L1 334 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 EXTL1Q92935 676 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 TUBA4BQ9H853 241 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 SPTA1P02549 2419 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 PDCD6O75340 191 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
CNOT9-208ENST00000542068 IAPPP10997 89 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 OR2T2Q6IF00 324 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 SPSB1Q96BD6 273 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 RSG1Q9BU20 258 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 C12orf49Q9H741 205 aa13.19□□□□□ -0.3
CNOT9-208ENST00000542068 CADP27708 2225 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 MMP9P14780 707 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 PAX6P26367 422 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
CNOT9-208ENST00000542068 DEFA6Q01524 100 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 OR4D5Q8NGN0 318 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 ANGPTL4Q9BY76 406 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 NOSIPQ9Y314 301 aaKnown RBP13.18□□□□□ -0.3
CNOT9-208ENST00000542068 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 TRDCB7Z8K6 153 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 IGLV3-1P01715 115 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 SRP19P09132 144 aaKnown RBP13.18□□□□□ -0.3
CNOT9-208ENST00000542068 MRPS34P82930 218 aaKnown RBP13.18□□□□□ -0.3
CNOT9-208ENST00000542068 PSG4Q00888 419 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF488Q96MN9 340 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 PROK2Q9HC23 129 aa13.18□□□□□ -0.3
CNOT9-208ENST00000542068 HS3ST1O14792 307 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 CER1O95813 267 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 DTYMKP23919 212 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 RAB1AP62820 205 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 ELOBQ15370 118 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 ADPRHL1Q8NDY3 354 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 PLEKHF2Q9H8W4 249 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 DOCK11Q5JSL3 2073 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 C5orf49A4QMS7 147 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 GJE1A6NN92 205 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 SCAF4O95104 1147 aaKnown RBP13.17□□□□□ -0.3
CNOT9-208ENST00000542068 CNOT4O95628 575 aaKnown RBP13.17□□□□□ -0.3
CNOT9-208ENST00000542068 TK1P04183 234 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HOXA5P20719 270 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 BCL3P20749 454 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HAAOP46952 286 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 MLF1P58340 268 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
CNOT9-208ENST00000542068 LFNGQ8NES3 379 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 DEPPQ9NTK1 212 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HSF4Q9ULV5 492 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 TECTAO75443 2155 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 SOD3P08294 240 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 EDN3P14138 238 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 FUT3P21217 361 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 CTSSP25774 331 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 GPM6AP51674 278 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms