RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RAG2P55895 527 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 LGALS4P56470 323 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 RELBQ01201 579 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 LDLRAD2Q5SZI1 272 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 PRAMEF5Q5TYX0 476 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 GLT8D1Q68CQ7 371 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 SLC35E4Q6ICL7 350 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 RTN4RL2Q86UN3 420 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 TMEM203Q969S6 136 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 MALSU1Q96EH3 234 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 Q96M66 194 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 YTHDF1Q9BYJ9 559 aaKnown RBP10.62□□□□□ -0.71
LTBR-208ENST00000541005 TNFRSF19Q9NS68 423 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 WNK1Q9H4A3 2382 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 MEIKINA0A087WXM9 373 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 TMEM30CPA0ZSE6 113 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 H3BUX3 64 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 ARL6IP5O75915 188 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 GDNFP39905 211 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 GLP1RP43220 463 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 DYNLT3P51808 116 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 EMX1Q04741 257 aaPredicted RBP10.61□□□□□ -0.71
LTBR-208ENST00000541005 SSX1Q16384 188 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 C3orf56Q8N813 242 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 ZNF565Q8N9K5 539 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 TMEM104Q8NE00 496 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 OR4P4Q8NGL7 312 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 OR13A1Q8NGR1 328 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 KIRREL1Q96J84 757 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 SSX3Q99909 188 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 CST11Q9H112 138 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 NDUFB11Q9NX14 153 aa10.61□□□□□ -0.71
LTBR-208ENST00000541005 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 POM121CA8CG34 1229 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 H3BUI4 141 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 SLC22A1O15245 554 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 IL1AP01583 271 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 IGLV1-47P01700 117 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 GLAP06280 429 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 GALP22466 123 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 QRFPP83859 136 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 FABP5Q01469 135 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 UBE2UQ5VVX9 321 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 DHRS7BQ6IAN0 325 aaPredicted RBP10.6□□□□□ -0.71
LTBR-208ENST00000541005 CD200R1LQ6Q8B3 271 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 BAIAP2L2Q6UXY1 529 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 ZNF497Q6ZNH5 498 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 DYNAPQ8N1N2 210 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 GAPTQ8N292 157 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 OR10A7Q8NGE5 316 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 ZNF596Q8TC21 504 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 FCGR1BQ92637 280 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
LTBR-208ENST00000541005 GFI1Q99684 422 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 SELENOIQ9C0D9 397 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 BANF2Q9H503 90 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 ING3Q9NXR8 418 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 CALYQ9NYX4 217 aa10.6□□□□□ -0.71
LTBR-208ENST00000541005 CA11O75493 328 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 CRTAPO75718 401 aaPredicted RBP10.59□□□□□ -0.71
LTBR-208ENST00000541005 BPNT1O95861 308 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 MDKP21741 143 aaPredicted RBP10.59□□□□□ -0.71
LTBR-208ENST00000541005 OMGP23515 440 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 HTR1DP28221 377 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 HTR2CP28335 458 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 DYNC1I2Q13409 638 aaKnown RBP10.59□□□□□ -0.71
LTBR-208ENST00000541005 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
LTBR-208ENST00000541005 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 RAB12Q6IQ22 244 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 SPARTQ8N0X7 666 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 CREB3L1Q96BA8 519 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 ZNF286AQ9HBT8 521 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 RAB18Q9NP72 206 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
LTBR-208ENST00000541005 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 MCRIP1C9JLW8 97 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 HAX1O00165 279 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 SLC17A2O00624 439 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 TSPAN9O75954 239 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 MT-ND4P03905 459 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 GZMHP20718 246 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 FUT3P21217 361 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 PAX6P26367 422 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
LTBR-208ENST00000541005 SSTR5P35346 364 aa10.58□□□□□ -0.72
LTBR-208ENST00000541005 UNC119Q13432 240 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms