RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 TCTEX1D2Q8WW35 142 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 MRGPRFQ96AM1 343 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 ZNF107Q9UII5 783 aaPredicted RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 SYNGR3O43761 229 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 RHBDL1O75783 438 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 TAGLN2P37802 199 aaKnown RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 HOXA4Q00056 320 aaPredicted RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 MDP1Q86V88 176 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 ZNF573Q86YE8 665 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 PHYHIPLQ96FC7 376 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 REG4Q9BYZ8 158 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 PLEKHA2Q9HB19 425 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 C19orf12Q9NSK7 152 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 ZFP57Q9NU63 452 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 OSGIN2Q9Y236 505 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 INTS1Q8N201 2190 aaKnown RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 A8MXK9 166 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 TAAR5O14804 337 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 CHATP28329 748 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 CEACAM6P40199 344 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 ECI1P42126 302 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 GNG3P63215 75 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 QRFPP83859 136 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 ZNF266Q14584 549 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 NECAP1Q8NC96 275 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 LHFPL5Q8TAF8 219 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 TMEM54Q969K7 222 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 RBMXL1Q96E39 390 aaKnown RBP8.53□□□□□ -1.04
PHC1-208ENST00000540574 hCG_1809904A0A1W2PP81 198 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 A0A1W2PR64 198 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 A0A1W2PRV1 198 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 DYNLT3P51808 116 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 C10orf128Q5T292 105 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 TMEM178AQ8NBL3 297 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 IL2RAP01589 272 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 CSRP1P21291 193 aaKnown RBP8.52□□□□□ -1.05
PHC1-208ENST00000540574 SLC25A53Q5H9E4 307 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 DMBX1Q8NFW5 382 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 MRGPRDQ8TDS7 321 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 TMEM9BQ9NQ34 198 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 LIPGQ9Y5X9 500 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.52□□□□□ -1.05
PHC1-208ENST00000540574 PSG2P11465 335 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 ARR3P36575 388 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 PPP1CCP36873 323 aaKnown RBP8.52□□□□□ -1.05
PHC1-208ENST00000540574 OR3A1P47881 315 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 ASB13Q8WXK3 278 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 NRIP2Q9BQI9 281 aa8.52□□□□□ -1.05
PHC1-208ENST00000540574 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 MUC3AQ02505 3323 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 PROB1E7EW31 1015 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 CRYBA1P05813 215 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 FBP1P09467 338 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 H3F3AP84243 136 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 RHEBQ15382 184 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 RSPO1Q2MKA7 263 aaPredicted RBP8.51□□□□□ -1.05
PHC1-208ENST00000540574 POC1AQ8NBT0 407 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 RTL8AQ9BWD3 113 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 ARFGEF3Q5TH69 2177 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 A0A1W2PPH5 198 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 CRYM-AS1A6NIL9 109 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 C9orf172C9J069 976 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
PHC1-208ENST00000540574 GPR137BO60478 399 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 S100A2P29034 98 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 EWSR1Q01844 656 aaKnown RBP eCLIP8.51□□□□□ -1.05
PHC1-208ENST00000540574 AWAT1Q58HT5 328 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 ZNF818PQ6ZRF7 136 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 C1orf147Q96MC9 270 aaPredicted RBP8.51□□□□□ -1.05
PHC1-208ENST00000540574 C12orf57Q99622 126 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 TMEM131Q92545 1883 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 OTOGLQ3ZCN5 2332 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 LRRC3CA6NJW4 275 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 ZNF716A6NP11 495 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 CELA3BP08861 270 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 SPP1P10451 314 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 NQO2P16083 231 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 DHODHQ02127 395 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 BAXQ07812 192 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 PRAMEF6Q5VXH4 476 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 ABHD14AQ9BUJ0 271 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 PROK2Q9HC23 129 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 MED9Q9NWA0 146 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 OR1A1Q9P1Q5 309 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 V9GYS6 101 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
PHC1-208ENST00000540574 RAB19A4D1S5 217 aa8.5□□□□□ -1.05
PHC1-208ENST00000540574 LILRA1O75019 489 aa8.5□□□□□ -1.05
PHC1-208ENST00000540574 DEDDO75618 318 aa8.5□□□□□ -1.05
PHC1-208ENST00000540574 NAT2P11245 290 aa8.5□□□□□ -1.05
PHC1-208ENST00000540574 NDUFA6P56556 154 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms