RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 ANK3Q12955 4377 aaKnown RBP12.23□□□□□ -0.45
MDM1-210ENST00000540418 UBE2QL1A1L167 161 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 CA11O75493 328 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 MT-ND4P03905 459 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 BPIFB3P59826 476 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 SCGB2A2Q13296 93 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 CLVS1Q8IUQ0 354 aaPredicted RBP12.23□□□□□ -0.45
MDM1-210ENST00000540418 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 SLC25A46Q96AG3 418 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 FAAP24Q9BTP7 215 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 GAL3ST2Q9H3Q3 398 aa12.23□□□□□ -0.45
MDM1-210ENST00000540418 SONP18583 2426 aaKnown RBP12.23□□□□□ -0.45
MDM1-210ENST00000540418 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 TRAV40A0A0B4J280 105 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 METTL21EPA6NDL7 271 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
MDM1-210ENST00000540418 PAHP00439 452 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 ERVFRD-1P60508 538 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 NCR3LG1Q68D85 454 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 SULT4A1Q9BR01 284 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 EPHA1P21709 976 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 TMBIM6P55061 237 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 TMEM50BP56557 158 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 Q6ZTK2 550 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 GAPTQ8N292 157 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 OR13A1Q8NGR1 328 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 HEXA-AS1Q9H8Q6 139 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 ABRACLQ9P1F3 81 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 ETV7Q9Y603 341 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 WNK2Q9Y3S1 2297 aa12.22□□□□□ -0.45
MDM1-210ENST00000540418 ZNF729A6NN14 1252 aaPredicted RBP12.21□□□□□ -0.45
MDM1-210ENST00000540418 RNASEK-C17orf49H0YIS7 233 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 CGB3P0DN86 165 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 CGB7P0DN87 165 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
MDM1-210ENST00000540418 GZMHP20718 246 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 FPR2P25090 351 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 DLX1P56177 255 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 GUCA2AQ02747 115 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 LGALS14Q8TCE9 139 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 RAB2BQ8WUD1 216 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 NIPBLQ6KC79 2804 aaeCLIP12.21□□□□□ -0.45
MDM1-210ENST00000540418 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 KBTBD11-OT1A0A1B0GTJ5 212 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 GLP1RP43220 463 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.45
MDM1-210ENST00000540418 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 DYRK2Q92630 601 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
MDM1-210ENST00000540418 ZNF69Q9UC07 566 aa12.21□□□□□ -0.45
MDM1-210ENST00000540418 UBE2E1P51965 193 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 HEPN1Q6WQI6 88 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 PDZD9Q8IXQ8 264 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 OR5H6Q8NGV6 325 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 OR10R2Q8NGX6 335 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 CCDC107Q8WV48 283 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 RAB3CQ96E17 227 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 PECRQ9BY49 303 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 TRAPPC2LQ9UL33 140 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 TRAV39A0A0B4J263 110 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 RAB27BO00194 218 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 CLPXO76031 633 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 RORCP51449 518 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 KLRD1Q13241 179 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 MOGAT2Q3SYC2 334 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 HCP5Q6MZN7 132 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 NDNFQ8TB73 568 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 SESN1Q9Y6P5 492 aa12.2□□□□□ -0.46
MDM1-210ENST00000540418 CDK2P24941 298 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 BRD3OSQ6XYD6 125 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 ZNF782Q6ZMW2 699 aaPredicted RBP12.19□□□□□ -0.46
MDM1-210ENST00000540418 RTN4RL2Q86UN3 420 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 OR4K15Q8NH41 348 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
MDM1-210ENST00000540418 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 MMP23AO75900 390 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 RUSC1-AS1Q66K80 236 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 OR52W1Q6IF63 320 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
MDM1-210ENST00000540418 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
MDM1-210ENST00000540418 C22orf15Q8WYQ4 148 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 RIMS4Q9H426 269 aaPredicted RBP12.19□□□□□ -0.46
MDM1-210ENST00000540418 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
MDM1-210ENST00000540418 AK3Q9UIJ7 227 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms