RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 AADACL3Q5VUY0 350 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 DTX1Q86Y01 620 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 BAGE3Q86Y29 109 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 BAGE2Q86Y30 109 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 ZNF709Q8N972 641 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 OR5L2Q8NGL0 311 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 REEP6Q96HR9 211 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 FAM60AQ9NP50 221 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 MMP25Q9NPA2 562 aa7.59□□□□□ -1.2
DDB1-217ENST00000540166 COA3Q9Y2R0 106 aaPredicted RBP7.59□□□□□ -1.2
DDB1-217ENST00000540166 CYR61O00622 381 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 TP53I11O14683 189 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 P04436 131 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 OR4A8P0C604 315 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 PGCP20142 388 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RAB7AP51149 207 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RPL19P84098 196 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 ENDOGQ14249 297 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 CIB3Q96Q77 187 aaPredicted RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 GINS3Q9BRX5 216 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 MAGT1Q9H0U3 335 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 OR51B6Q9H340 312 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SRD5A3Q9H8P0 318 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 LANCL2Q9NS86 450 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 PLA2G3Q9NZ20 509 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SSSCA1O60232 199 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 LYPD3O95274 346 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 ABHD16AO95870 558 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 HLA-HP01893 362 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SERPINA7P05543 415 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 CHRNB4P30926 498 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 TNFSF10P50591 281 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 HNRNPA3P51991 378 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 MPV17LQ2QL34 196 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 GRINAQ7Z429 371 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RPS19BP1Q86WX3 136 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 OR5C1Q8NGR4 320 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 HOXB13Q92826 284 aaPredicted RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 ANKRD9Q96BM1 317 aaPredicted RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 BTF3L4Q96K17 158 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RBM7Q9Y580 266 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 ZNF320A2RRD8 509 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 TIAF1O95411 115 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 ACKR1Q16570 336 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 RTL6Q6ICC9 239 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 ZNF774Q6NX45 483 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 ZNF573Q86YE8 665 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 OR13G1Q8NGZ3 307 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 ZNF845Q96IR2 970 aaPredicted RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 TSPAN32Q96QS1 320 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 GAL3ST2Q9H3Q3 398 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 ZNF552Q9H707 407 aaPredicted RBP7.58□□□□□ -1.2
DDB1-217ENST00000540166 Q9N2K0 584 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SLC39A9Q9NUM3 307 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 SEMA5BQ9P283 1151 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 B4GALT7Q9UBV7 327 aa7.58□□□□□ -1.2
DDB1-217ENST00000540166 MPDZO75970 2070 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 PRSS37A4D1T9 235 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 KLRC4-KLRK1H3BQV0 150 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 UTS2O95399 124 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 PLA2G2AP14555 144 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 MSX1P28360 303 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 TPPP2P59282 170 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 EWSR1Q01844 656 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■□□□□ 10.3
DDB1-217ENST00000540166 FAM69BQ5VUD6 431 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 OR2T10Q8NGZ9 312 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 PLEKHF2Q9H8W4 249 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 LYRM2Q9NU23 88 aaPredicted RBP7.57□□□□□ -1.2
DDB1-217ENST00000540166 TRAPPC1Q9Y5R8 145 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 TRAV34A0A0B4J273 112 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 MAP1LC3B2A6NCE7 125 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 HSD17B6O14756 317 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 ONECUT2O95948 504 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 FSTP19883 344 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 THBS4P35443 961 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 CYB561P49447 251 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 FAM3BP58499 235 aaPredicted RBP7.57□□□□□ -1.2
DDB1-217ENST00000540166 RPL27P61353 136 aaKnown RBP7.57□□□□□ -1.2
DDB1-217ENST00000540166 CCL20P78556 96 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 PLCXD2Q0VAA5 305 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 GAGE1Q13065 139 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 BSXQ3C1V8 233 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 C1orf100Q5SVJ3 147 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 C1orf140Q5VVS0 124 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 DPPA3Q6W0C5 159 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.57□□□□□ -1.2
DDB1-217ENST00000540166 CORO2AQ92828 525 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 TMEM230Q96A57 120 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 MRGPRX4Q96LA9 322 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 OR2J1Q9GZK6 312 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 MAP1LC3BQ9GZQ8 125 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 USP24Q9UPU5 2620 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 A0A1W2PNV4 684 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 NXPH3O95157 252 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 GNLYP22749 145 aa7.57□□□□□ -1.2
DDB1-217ENST00000540166 TFPI2P48307 235 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms