RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RBPJQ06330 500 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 UNC119Q13432 240 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 CNN3Q15417 329 aaKnown RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 COA6Q5JTJ3 125 aaKnown RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 MRPL2Q5T653 305 aaKnown RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 METRNLQ641Q3 311 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 RD3Q7Z3Z2 195 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 OR1B1Q8NGR6 318 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 RAB18Q9NP72 206 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 P4HTMQ9NXG6 502 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 ABI3Q9P2A4 366 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 ZNF443Q9Y2A4 671 aaPredicted RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 MUC6Q6W4X9 2439 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 MUC21A0A0G2JKD1 596 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 MUC21A0A140T8X8 626 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OR5B21A6NL26 309 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 H7BYZ3 331 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 K7ESF4 209 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 GPRIN2O60269 458 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZNF217O75362 1048 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CLEC3AO75596 197 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 KLKB1P03952 638 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OPN1MWP04001 364 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OPN1MW2P0DN77 364 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OPN1MW3P0DN78 364 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PF4V1P10720 104 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CPMP14384 443 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ATP1B2P14415 290 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 IL3RAP26951 378 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 BSGP35613 385 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CTRLP40313 264 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PNPLA4P41247 253 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PSG9Q00887 426 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZP4Q12836 540 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 TMEM41BQ5BJD5 291 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 MUC21Q5SSG8 566 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PRAMEF5Q5TYX0 476 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PRAMEF6Q5VXH4 476 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZNF793Q6ZN11 406 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 TMEM144Q7Z5S9 345 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 SYS1Q8N2H4 156 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZDHHC22Q8N966 263 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 NUP43Q8NFH3 380 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 TSTD1Q8NFU3 115 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PLPPR1Q8TBJ4 325 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PTPMT1Q8WUK0 201 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZNF501Q96CX3 271 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 NUS1Q96E22 293 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 SMIM12Q96EX1 92 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 UHRF2Q96PU4 802 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 SMIM7Q9BQ49 75 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 RSG1Q9BU20 258 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 BET1LQ9NYM9 111 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 WASHC3Q9Y3C0 194 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 WIPI2Q9Y4P8 454 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 FREM2Q5SZK8 3169 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PCNX3Q9H6A9 2034 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 A0A0A6YYD4 124 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 BORCS7-ASMTA0A0B4J1R7 106 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 TRBV5-4A0A0C4DH59 114 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 IGSF23A1L1A6 192 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 HIDE1A8MVS5 230 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 K7ERU9 68 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 LDB3O75112 727 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 RCBTB2O95199 551 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 KHKP50053 298 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 FOXL2P58012 376 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 HERV-K104P63124 156 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PHLDA2Q53GA4 152 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ALG10BQ5I7T1 473 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CXorf66Q5JRM2 361 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 TMEM225Q6GV28 225 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 Q6ZVL8 140 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 FAM220AQ7Z4H9 259 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 HAPLN4Q86UW8 402 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 TMEFF1Q8IYR6 380 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 C5orf17Q8NAS9 161 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OR2V1Q8NHB1 315 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZNF519Q8TB69 540 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 FNDC9Q8TBE3 224 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 C15orf40Q8WUR7 153 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ASB5Q8WWX0 329 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CACNG8Q8WXS5 425 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 OR5B12Q96R08 314 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 HDHD3Q9BSH5 251 aaPredicted RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 SLC46A2Q9BY10 475 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ANGPTL4Q9BY76 406 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 AICDAQ9GZX7 198 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 IGFLR1Q9H665 355 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 GP6Q9HCN6 339 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 PNO1Q9NRX1 252 aaKnown RBP3.22□□□□□ -1.89
MCF2-210ENST00000536274 ZNF586Q9NXT0 402 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 ADAM29Q9UKF5 820 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 CLEC4EQ9ULY5 219 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 MMP17Q9ULZ9 603 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 MEMO1Q9Y316 297 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 SPACA6W5XKT8 324 aa3.22□□□□□ -1.89
MCF2-210ENST00000536274 DIDO1Q9BTC0 2240 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms