RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SETXQ7Z333 2677 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 A0A096LPI6 279 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 A0A0J9YY10 115 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 A0A1B0GUH1 482 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 A0A1W2PPE3 182 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 FABP12A6NFH5 140 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 KLLNB2CW77 178 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 TRDCB7Z8K6 153 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 M0QZK8 103 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 WWP2O00308 870 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 UBFD1O14562 309 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 PHOX2AO14813 284 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 P2RX6O15547 441 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 DLEU1O43261 78 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MED6O75586 246 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 KLF7O75840 302 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 APOC3P02656 99 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 GIPP09681 153 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 PRPS2P11908 318 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CD1DP15813 335 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RAB3BP20337 219 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PVALBP20472 110 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 CCNOP22674 350 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 IMPA1P29218 277 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 DDTP30046 118 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 S100A11P31949 105 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 GGT2P36268 569 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MAGEA5P43359 124 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RFX3P48380 749 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 FHITP49789 147 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 EMDP50402 254 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 EFNA3P52797 238 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CRISP3P54108 245 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ATP1B3P54709 279 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PLP1P60201 277 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RAB5BP61020 215 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PKIAP61925 76 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PAX5Q02548 391 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 GLO1Q04760 184 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MLLT11Q13015 90 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 DGCR6Q14129 220 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 GPR176Q14439 515 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SMCO1Q147U7 214 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 TOMM34Q15785 309 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 DEFB110Q30KQ9 67 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SLC36A2Q495M3 483 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RNASE10Q5GAN6 216 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 VWA2Q5GFL6 755 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PAGE3Q5JUK9 113 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OLFML2AQ68BL7 652 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PTRHD1Q6GMV3 140 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 STEAP1BQ6NZ63 245 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 FAM199XQ6PEV8 388 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 SBSNQ6UWP8 590 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SPNS3Q6ZMD2 512 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RNF165Q6ZSG1 346 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 RASSF6Q6ZTQ3 369 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 COX15Q7KZN9 410 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CMC1Q7Z7K0 106 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ZNF584Q8IVC4 421 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PDZD9Q8IXQ8 264 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 HS3ST5Q8IZT8 346 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SVBPQ8N300 66 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ZNF561Q8N587 486 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 C2orf73Q8N5S3 287 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 GVQW1Q8N7I0 195 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 FAM86B1Q8N7N1 296 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 C15orf54Q8N8G6 183 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR2L3Q8NG85 312 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR5T3Q8NGG3 340 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR4A15Q8NGL6 344 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR1B1Q8NGR6 318 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR9A4Q8NGU2 314 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ZNF596Q8TC21 504 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 GPR148Q8TDV2 347 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 EEF1AKMT1Q8WVE0 214 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SMPDL3AQ92484 453 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MRPL24Q96A35 216 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 TM4SF19Q96DZ7 209 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PELI1Q96FA3 418 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SMIM8Q96KF7 97 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 YPEL4Q96NS1 127 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 OR4K3Q96R72 315 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 IL4I1Q96RQ9 567 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 PFDN5Q99471 154 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MGLLQ99685 303 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 SEC11CQ9BY50 192 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ULBP3Q9BZM4 244 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 ACTR6Q9GZN1 396 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 AICDAQ9GZX7 198 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 NXF5Q9H1B4 397 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 RHOJQ9H4E5 214 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CACYBPQ9HB71 228 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 ABCB9Q9NP78 766 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 LHX9Q9NQ69 397 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 TMEM100Q9NV29 134 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 C14orf105Q9NVL8 296 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 AIG1Q9NVV5 245 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 MTCH1Q9NZJ7 389 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CCDC167Q9P0B6 97 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms