RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 A0A096LNJ9 63 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 LOC102724200A0A096LPH7 203 aaPredicted RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 A0A0G2JMP0 313 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 A0A0X1KG70 313 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 C11orf94C9JXX5 98 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 PLIN3O60664 434 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 EIF1BO60739 113 aaKnown RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 HLA-DQA1P01909 254 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 SNRPAP09012 282 aaKnown RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 IMPA1P29218 277 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 EIF1P41567 113 aaKnown RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 CXCL12P48061 93 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 WNT4P56705 351 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 TAS2R43P59537 309 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 NDPQ00604 133 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 SKP2Q13309 424 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 MPPED2Q15777 294 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 LRRC75BQ2VPJ9 315 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 AKIRIN2Q53H80 203 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 CLVS2Q5SYC1 327 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 FAM222AQ5U5X8 452 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 MARCH3Q86UD3 253 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 C1orf158Q8N1D5 194 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 TMEM161BQ8NDZ6 487 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 OR5B17Q8NGF7 314 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 OR1P1Q8NH06 330 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 OR5W2Q8NH69 310 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 ELSPBP1Q96BH3 223 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 PDXPQ96GD0 296 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 CCDC42Q96M95 316 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 ZIM3Q96PE6 472 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 SDHCQ99643 169 aaPredicted RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 IL37Q9NZH6 218 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 ZNRD1Q9P1U0 126 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 NYAP2Q9P242 653 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.53□□□□□ -2
HIPK3-206ENST00000534262 SAMHD1Q9Y3Z3 626 aaKnown RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
HIPK3-206ENST00000534262 TOP2BQ02880 1626 aa2.53□□□□□ -2
HIPK3-206ENST00000534262 MROH2BQ7Z745 1585 aa2.53□□□□□ -2.01
HIPK3-206ENST00000534262 GRIN2BQ13224 1484 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 FLT4P35916 1363 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 WI2-2373I1.2A0A1W2PRP0 233 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 TMEM223A0PJW6 202 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 K7EPK0 472 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 COX7A2P2O60397 106 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 FADS1O60427 444 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 GATBO75879 557 aaKnown RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ATP5G1P05496 136 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF708P17019 499 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF19P17023 458 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 CNTFRP26992 372 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 AGTR1P30556 359 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 RAP1GDS1P52306 607 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 RAB5BP61020 215 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 AESQ08117 197 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 SRSF6Q13247 344 aaKnown RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF79Q15937 498 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 HIST3H3Q16695 136 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 FAM78AQ5JUQ0 283 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 SPOPLQ6IQ16 392 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 TNFAIP8L2Q6P589 184 aaPredicted RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 NEGR1Q7Z3B1 354 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 LINC00596Q86U02 117 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF433Q8N7K0 673 aaPredicted RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 OR11L1Q8NGX0 322 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 OR6K3Q8NGY3 331 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 OR52N1Q8NH53 320 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 DTD1Q8TEA8 209 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 C16orf78Q8WTQ4 265 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 TNFAIP8L1Q8WVP5 186 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 YPEL4Q96NS1 127 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 MS4A8Q9BY19 250 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 MROQ9BYG7 248 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 MRPS26Q9BYN8 205 aaKnown RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ZNF436Q9C0F3 470 aaPredicted RBP2.52□□□□□ -2.01
HIPK3-206ENST00000534262 TLNRD1Q9H1K6 362 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 IFI27L2Q9H2X8 130 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 OR12D3Q9UGF7 316 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ARAP3Q8WWN8 1544 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 ABCC10Q5T3U5 1492 aa2.52□□□□□ -2.01
HIPK3-206ENST00000534262 KIF21AQ7Z4S6 1674 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 TTC21AQ8NDW8 1320 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 COL16A1Q07092 1604 aaPredicted RBP2.51□□□□□ -2.01
HIPK3-206ENST00000534262 VWA8A3KMH1 1905 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 CENPVL3A0A0U1RRI6 287 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 TEX50A0A1B0GTY4 177 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 M0QYV0 167 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 KCNK1O00180 336 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 GABRA1P14867 456 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 CXCL2P19875 107 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 ME2P23368 584 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 SLC6A1P30531 599 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 PYCR1P32322 319 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 RCVRNP35243 200 aa2.51□□□□□ -2.01
HIPK3-206ENST00000534262 H2BFSP57053 126 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms