RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR10X1Q8NGY0 326 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 HAVCR2Q8TDQ0 301 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 THEM6Q8WUY1 208 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 LRGUKQ96M69 825 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 JAM3Q9BX67 310 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 TSSK6Q9BXA6 273 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 PPIL3Q9H2H8 161 aaKnown RBP6.24□□□□□ -1.41
CD44-232ENST00000531118 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
CD44-232ENST00000531118 PARP11Q9NR21 331 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 ARMC1Q9NVT9 282 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 GID8Q9NWU2 228 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 ING3Q9NXR8 418 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 CALYQ9NYX4 217 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 IL20Q9NYY1 176 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 SIGLEC8Q9NYZ4 499 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 OR6C3Q9NZP0 311 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 PSG11Q9UQ72 335 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 KLK5Q9Y337 293 aaPredicted RBP6.24□□□□□ -1.41
CD44-232ENST00000531118 V9GYS6 101 aa6.24□□□□□ -1.41
CD44-232ENST00000531118 DMBT1Q9UGM3 2413 aaPredicted RBP6.24□□□□□ -1.41
CD44-232ENST00000531118 TRAV41A0A0B4J266 112 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 KBTBD11-OT1A0A1B0GTJ5 212 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 A0A1W2PPE3 182 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 A6NIN4 97 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 NME4O00746 187 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 SOX14O95416 240 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 MOSP00540 346 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 IL1AP01583 271 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 TTRP02766 147 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 SEMG1P04279 462 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 CSN2P05814 226 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 CALCBP10092 127 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 BCL3P20749 454 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 NPBWR2P48146 333 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 CD81P60033 236 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 BNIP1Q12981 228 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 LTC4SQ16873 150 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 ECSCRQ19T08 205 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 ZNF829Q3KNS6 432 aaPredicted RBP6.23□□□□□ -1.41
CD44-232ENST00000531118 KRBOX4Q5JUW0 171 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 LINC00336Q6ZUF6 198 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 FAM58AQ8N1B3 248 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 TMEM104Q8NE00 496 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 OR2T33Q8NG76 320 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 OR8H1Q8NGG4 311 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 OR14K1Q8NGZ2 314 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 FLYWCH2Q96CP2 140 aaKnown RBP6.23□□□□□ -1.41
CD44-232ENST00000531118 MBOAT4Q96T53 435 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 BTBD10Q9BSF8 475 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 CMC2Q9NRP2 79 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 IDI2-AS1Q9NZ38 188 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 BAIAP2Q9UQB8 552 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 AP3M1Q9Y2T2 418 aa6.23□□□□□ -1.41
CD44-232ENST00000531118 TCRBV5S2A0A599 114 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 DHRS7CA6NNS2 312 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SOX15O60248 233 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 CNIH1O95406 144 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 IGHV3-11P01762 117 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 GAPDHP04406 335 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 HSPB1P04792 205 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 PI3P19957 117 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 RRM2P31350 389 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 F2RL1P55085 397 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 NDPQ00604 133 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SF3A3Q12874 501 aaKnown RBP eCLIP6.22□□□□□ -1.41
CD44-232ENST00000531118 GALEQ14376 348 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 C19orf54Q5BKX5 351 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SAMD4BQ5PRF9 694 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 RASSF6Q6ZTQ3 369 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 Q8N402 240 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 MINDY2Q8NBR6 621 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 OR13A1Q8NGR1 328 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 CASTOR1Q8WTX7 329 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 OTULINQ96BN8 352 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 RCN3Q96D15 328 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 OSBPL10Q9BXB5 764 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 TTTY10Q9BZA0 68 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SRD5A3Q9H8P0 318 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 MOB1AQ9H8S9 216 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 PLEKHA1Q9HB21 404 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SLC25A19Q9HC21 320 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 IL1RAPQ9NPH3 570 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 KRT84Q9NSB2 600 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 FGFR1OP2Q9NVK5 253 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 ZNF446Q9NWS9 450 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 MRM2Q9UI43 246 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 COPS3Q9UNS2 423 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 SAMD4AQ9UPU9 718 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
CD44-232ENST00000531118 V9GYQ6 96 aa6.22□□□□□ -1.41
CD44-232ENST00000531118 IGHV7-81A0A0B4J1V7 117 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 A0A0J9YWU9 116 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 A0A1W2PN81 502 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 IZUMO1RA6ND01 250 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms