RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ZNF726A6NNF4 738 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 E9PLD3 99 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 F6UB75 175 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 I3L4J1 428 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 UBDO15205 165 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 DPM1O60762 260 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 PTTG1O95997 202 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 MT-ND4P03905 459 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CRHP06850 196 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 RBMY1CP0DJD4 496 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 AZU1P20160 251 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 IL2RGP31785 369 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 PFN2P35080 140 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 GPR6P46095 362 aaPredicted RBP4.17□□□□□ -1.74
PCF11-202ENST00000528336 GCLMP48507 274 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 SULT1A1P50225 295 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 SULT1A2P50226 295 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CDKN2DP55273 166 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 LYZP61626 148 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 SMCO1Q147U7 214 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CCDC58Q4VC31 144 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 C11orf71Q6IPW1 123 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 PPP1R27Q86WC6 154 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 SLC34A3Q8N130 599 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 TMEM86AQ8N2M4 240 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CLDN22Q8N7P3 220 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 SRXN1Q9BYN0 137 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 MS4A6AQ9H2W1 248 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 RHOFQ9HBH0 211 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 RBM22Q9NW64 420 aaKnown RBP eCLIP4.17□□□□□ -1.74
PCF11-202ENST00000528336 TAS2R13Q9NYV9 303 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 ZNF257Q9Y2Q1 563 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 COQ4Q9Y3A0 265 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 ALG5Q9Y673 324 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 RALGAPA2Q2PPJ7 1873 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 GBF1Q92538 1859 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CITO14578 2027 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 CENPVL3A0A0U1RRI6 287 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ISPDA4D126 451 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 FAM220BPB1ANY3 271 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 PHYHO14832 338 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ZNF19P17023 458 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 S100A1P23297 94 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 WARSP23381 471 aaKnown RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 CRABP1P29762 137 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 RPL12P30050 165 aaKnown RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 PPICP45877 212 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 RPS9P46781 194 aaKnown RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 PFN3P60673 137 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 MXD1Q05195 221 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 FMODQ06828 376 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 BAXQ07812 192 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 CD47Q08722 323 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 TWF1Q12792 350 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 SKP2Q13309 424 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 GINS1Q14691 196 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 TOMM34Q15785 309 aaPredicted RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 NRF1Q16656 503 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 CLEC12BQ2HXU8 276 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 PYCR3Q53H96 274 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 TCEAL5Q5H9L2 206 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 WDR74Q6RFH5 385 aaPredicted RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 C12orf54Q6X4T0 127 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 TMEM144Q7Z5S9 345 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 RAB43Q86YS6 212 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 C10orf107Q8IVU9 208 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ARIH2OSQ8N7S6 290 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 OR52E2Q8NGJ4 325 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 OR52N1Q8NH53 320 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 MED8Q96G25 268 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 FAM210BQ96KR6 192 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 DOK1Q99704 481 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ZNF2Q9BSG1 426 aaPredicted RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 SELENOIQ9C0D9 397 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 RNF167Q9H6Y7 350 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ZNF430Q9H8G1 570 aaPredicted RBP4.16□□□□□ -1.74
PCF11-202ENST00000528336 UGT1A8Q9HAW9 530 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 TMEM9BQ9NQ34 198 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 FAM206AQ9NX38 181 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 GLTPQ9NZD2 209 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 VPS29Q9UBQ0 182 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 HHLA2Q9UM44 414 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 SNX10Q9Y5X0 201 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 KCNE3Q9Y6H6 103 aa4.16□□□□□ -1.74
PCF11-202ENST00000528336 ANK1P16157 1881 aa4.15□□□□□ -1.74
PCF11-202ENST00000528336 PRRC2BQ5JSZ5 2229 aaKnown RBP4.15□□□□□ -1.74
PCF11-202ENST00000528336 MYO9BQ13459 2157 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR11H12B2RN74 326 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 KMOO15229 486 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 CNIH1O95406 144 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 IFNA21P01568 189 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 HPNP05981 417 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 CT45A10P0DMU9 189 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 MPIP34949 423 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 KIR2DS2P43631 304 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 RPL29P47914 159 aaKnown RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 RPL32P62910 135 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms