RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 SHARPINQ9H0F6 387 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 TMEM165Q9HC07 324 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
CASP4-204ENST00000524843 ELOVL5Q9NYP7 299 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 ZNF581Q9P0T4 197 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 TAAR3PQ9P1P4 343 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 MSRB2Q9Y3D2 182 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 WIPI2Q9Y4P8 454 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 GVINP1Q7Z2Y8 2422 aa6.33□□□□□ -1.4
CASP4-204ENST00000524843 ESPL1Q14674 2120 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 COL6A3P12111 3177 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 A0A1W2PR80 420 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 FAM221AA4D161 298 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 A6NLC8 198 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 RNF212BA8MTL3 300 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 NUDT19A8MXV4 375 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 LEUTXA8MZ59 168 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 C1QTNF9BB2RNN3 333 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 F5H0A9 414 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 SLC33A1O00400 549 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 MPPED1O15442 326 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 MLNRO43193 412 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 DEDDO75618 318 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 ADAP1O75689 374 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 OR2H2O95918 312 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 HAND1O96004 215 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 IGHV3-13P01766 116 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 PDGFAP04085 211 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 NMBP08949 121 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 HOXB5P09067 269 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 SLC25A6P12236 298 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 ZNF250P15622 560 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 UCP1P25874 307 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 CFHR2P36980 270 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 LUMP51884 338 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 KLF3P57682 345 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 TMPRSS3P57727 454 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 SELENOVP59797 346 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 S100A10P60903 97 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 ERVS71-1P61550 626 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 RAB32Q13637 225 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 ATXN7L3Q14CW9 347 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 HMGN3Q15651 99 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 THOC7Q6I9Y2 204 aaKnown RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 SLC35E4Q6ICL7 350 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 Q6ZPA2 131 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 HSD17B13Q7Z5P4 300 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 PDZD9Q8IXQ8 264 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 FAM71E2Q8N5Q1 922 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 KDF1Q8NAX2 398 aaPredicted RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 ZBTB34Q8NCN2 500 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 OR5D13Q8NGL4 314 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 OR10J5Q8NHC4 309 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 RDH5Q92781 318 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 MSI2Q96DH6 328 aaKnown RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 SEC22AQ96IW7 307 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 AKR1E2Q96JD6 320 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 TMEM56Q96MV1 263 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 CNTNAP3BQ96NU0 1288 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 CNTNAP3Q9BZ76 1288 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 TMEM222Q9H0R3 208 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 DNTTIP1Q9H147 329 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 LIME1Q9H400 295 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 RAB9BQ9NP90 201 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 LIN7CQ9NUP9 197 aaKnown RBP6.32□□□□□ -1.4
CASP4-204ENST00000524843 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 IL36RNQ9UBH0 155 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 TP53TG5Q9Y2B4 290 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 OR2W1Q9Y3N9 320 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 TMEM56-RWDD3S4R434 201 aa6.32□□□□□ -1.4
CASP4-204ENST00000524843 WDR87Q6ZQQ6 2873 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 IGLV3-9A0A075B6K5 115 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 C3orf85A0A1B0GTC6 90 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 CLEC18AA5D8T8 446 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 OOEPA6NGQ2 149 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 E5RGE8 158 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 CDIPTO14735 213 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 BET1O15155 118 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 PHF1O43189 567 aaPredicted RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 RHBDL1O75783 438 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 SPDEFO95238 335 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 GLI4P10075 376 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 MMP9P14780 707 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 PVALBP20472 110 aaPredicted RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 GATA4P43694 442 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 SNTB1Q13884 538 aaKnown RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 HERPUD1Q15011 391 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 TSC22D1Q15714 1073 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 TBR1Q16650 682 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 IGSF11Q5DX21 431 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 ZNF474Q6S9Z5 364 aaPredicted RBP6.31□□□□□ -1.4
CASP4-204ENST00000524843 WDR82Q6UXN9 313 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 ACP7Q6ZNF0 438 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 CCDC28AQ8IWP9 274 aa6.31□□□□□ -1.4
CASP4-204ENST00000524843 EIF4E3Q8N5X7 224 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms