RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 UQCC2Q9BRT2 126 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 CLEC7AQ9BXN2 247 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 MEGF9Q9H1U4 602 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 DPAGT1Q9H3H5 408 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 GAL3ST2Q9H3Q3 398 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 CALYQ9NYX4 217 aa14.44□□□□□ -0.1
CLK4-211ENST00000522556 RCC2Q9P258 522 aaKnown RBP14.44□□□□□ -0.1
CLK4-211ENST00000522556 AK6Q9Y3D8 172 aaKnown RBP14.44□□□□□ -0.1
CLK4-211ENST00000522556 FUOMA2VDF0 154 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 ZNF729A6NN14 1252 aaPredicted RBP14.43□□□□□ -0.1
CLK4-211ENST00000522556 CHST1O43916 411 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 ZNF780AO75290 641 aaPredicted RBP14.43□□□□□ -0.1
CLK4-211ENST00000522556 VSIG8P0DPA2 414 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 LGALS4P56470 323 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 SRSF4Q08170 494 aaKnown RBP14.43□□□□□ -0.1
CLK4-211ENST00000522556 FOXL1Q12952 345 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 UNC119Q13432 240 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 SSX2Q16385 188 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 FBLN7Q53RD9 439 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 C5orf24Q7Z6I8 188 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 C3orf56Q8N813 242 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 NEK7Q8TDX7 302 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 CCDC107Q8WV48 283 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 Q9H521 79 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 OR6C3Q9NZP0 311 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 HILPDAQ9Y5L2 63 aa14.43□□□□□ -0.1
CLK4-211ENST00000522556 KBTBD11-OT1A0A1B0GTJ5 212 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 HAX1O00165 279 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 MPIG6BO95866 241 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 CD37P11049 281 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 NFYBP25208 207 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
CLK4-211ENST00000522556 GABRA5P31644 462 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 PAX5Q02548 391 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 P2RY14Q15391 338 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 FAM189A2Q15884 450 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 Q6ZSV7 163 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 LINC00596Q86U02 117 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 ABHD12Q8N2K0 398 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 NDUFB11Q9NX14 153 aa14.42□□□□□ -0.1
CLK4-211ENST00000522556 TBL2Q9Y4P3 447 aaKnown RBP14.42□□□□□ -0.1
CLK4-211ENST00000522556 A0A0A6YYD4 124 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 SLC22A1O15245 554 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 IL1AP01583 271 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 CLDN12P56749 244 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 OR10A3P58181 314 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 QRFPP83859 136 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 GPR176Q14439 515 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 UBE2UQ5VVX9 321 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 GLT8D1Q68CQ7 371 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 SLC35E4Q6ICL7 350 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 RAB12Q6IQ22 244 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 CCBE1Q6UXH8 406 aaPredicted RBP14.41□□□□□ -0.1
CLK4-211ENST00000522556 NDNFQ8TB73 568 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 BARHL1Q9BZE3 327 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 SLITRK2Q9H156 845 aa14.41□□□□□ -0.1
CLK4-211ENST00000522556 TMEM30CPA0ZSE6 113 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 UBE2QL1A1L167 161 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 BTBD17A6NE02 478 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 NPIPB11E5RHQ5 1161 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 C15orf65H3BRN8 121 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 NDUFA7O95182 113 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 IGLV1-47P01700 117 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 CRYBA1P05813 215 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 PSMB9P28065 219 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 HTR2CP28335 458 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 CD34P28906 385 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 KCNJ3P48549 501 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 KRTAP10-3P60369 221 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 PLA2G7Q13093 441 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 DHRS7BQ6IAN0 325 aaPredicted RBP14.4□□□□□ -0.1
CLK4-211ENST00000522556 ZNF497Q6ZNH5 498 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 OR4K15Q8NH41 348 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 OR5R1Q8NH85 324 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 MRPS24Q96EL2 167 aaKnown RBP14.4□□□□□ -0.1
CLK4-211ENST00000522556 IDI2-AS1Q9NZ38 188 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 PEX16Q9Y5Y5 336 aa14.4□□□□□ -0.1
CLK4-211ENST00000522556 A0A087X0M5 115 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 A0A1B0GX30 115 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 A0A1W2PPE3 182 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 SMIM30A4D0T7 59 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 TMEM14DPA8MWL7 114 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 MT-ND4P03905 459 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 PSMA1P25786 263 aaKnown RBP14.39□□□□□ -0.11
CLK4-211ENST00000522556 GNG10P50151 68 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 TRAM1Q15629 374 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 NKAPLQ5M9Q1 402 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 CD200R1LQ6Q8B3 271 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 Q6ZPA2 131 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 SVOPQ8N4V2 548 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 LINC01006Q8NI28 216 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 NCOR1P1Q9H4R4 102 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 LINC00574Q9H8X3 128 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 PCDHB16Q9NRJ7 776 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 ETAA1Q9NY74 926 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
CLK4-211ENST00000522556 IGHV3-43A0A0B4J1X8 118 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms