RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GNG10P50151 68 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 SAMD5Q5TGI4 173 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 OSR2Q8N2R0 312 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 DHRSXQ8N5I4 330 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 GGHQ92820 318 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 GHSRQ92847 366 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 DPCDQ9BVM2 203 aaPredicted RBP16.53■□□□□ 0.24
SDCBP-209ENST00000522243 A0A1W2PP11 408 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 MAGEA13PA6NCF6 341 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 J3QR06 171 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 OR7C1O76099 320 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 PRB2P02812 416 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 MNDAP41218 407 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 ADARB1P78563 741 aaKnown RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 C9orf152Q5JTZ5 239 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 DMKNQ6E0U4 476 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 CENPVQ7Z7K6 275 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 SETD9Q8NE22 299 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 OR52N1Q8NH53 320 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 TOMM40LQ969M1 308 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 RPEQ96AT9 228 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 S100A13Q99584 98 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 NCOR1P1Q9H4R4 102 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 CHCHD3Q9NX63 227 aaKnown RBP16.52■□□□□ 0.24
SDCBP-209ENST00000522243 PSG11Q9UQ72 335 aa16.52■□□□□ 0.24
SDCBP-209ENST00000522243 TRBV5-5A0A0J9YX44 114 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 PNMA8CA0A1B0GUJ8 204 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 A0A1W2PPK0 400 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 NPIPB11E5RHQ5 1161 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 GEMIN2O14893 280 aaKnown RBP16.51■□□□□ 0.23
SDCBP-209ENST00000522243 AMY1AP04745 511 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 AMY2AP04746 511 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 IGFBP3P17936 291 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-209ENST00000522243 SSTR5P35346 364 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 KCNJ3P48549 501 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 RBM11P57052 281 aaKnown RBP16.51■□□□□ 0.23
SDCBP-209ENST00000522243 RIPK1Q13546 671 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 DIAPH2-AS1Q14236 149 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 OXLD1Q5BKU9 147 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 ATAD3CQ5T2N8 411 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 CCDC144NLQ6NUI1 221 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 OR4F17Q8NGA8 305 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 OR4F4Q96R69 305 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 ZNF184Q99676 751 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-209ENST00000522243 IL36GQ9NZH8 169 aa16.51■□□□□ 0.23
SDCBP-209ENST00000522243 AMMECR1Q9Y4X0 333 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-209ENST00000522243 TRAV8-7A0A075B6U6 113 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 A0A1W2PPE3 182 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 OOSP1A8MZH6 123 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
SDCBP-209ENST00000522243 CD83Q01151 205 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 ST3GAL4Q11206 333 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 MED21Q13503 144 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 RCN1Q15293 331 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 SLC22A6Q4U2R8 563 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 PACRGLQ8N7B6 248 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 OR56B4Q8NH76 319 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 UBALD1Q8TB05 177 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 PGLYRP3Q96LB9 341 aa16.5■□□□□ 0.23
SDCBP-209ENST00000522243 XPNPEP2O43895 674 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 SNRNP70P08621 437 aaKnown RBP16.49■□□□□ 0.23
SDCBP-209ENST00000522243 Q499Y3 187 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 C10orf99Q6UWK7 81 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 ZNF485Q8NCK3 441 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 CCDC107Q8WV48 283 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 OR14A2Q96R54 314 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
SDCBP-209ENST00000522243 NOTCH1P46531 2555 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 GNAO1P09471 354 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 PAX5Q02548 391 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 YIF1BQ5BJH7 314 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 TCTEX1D4Q5JR98 221 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 NHLRC3Q5JS37 347 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 LAIR2Q6ISS4 152 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 DRAM1Q8N682 238 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 NEK7Q8TDX7 302 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 MUL1Q969V5 352 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 IFT22Q9H7X7 185 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 C8orf4Q9NR00 106 aa16.48■□□□□ 0.23
SDCBP-209ENST00000522243 PAK1IP1Q9NWT1 392 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-209ENST00000522243 A0A1W2PPI3 338 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 TMEM30CPA0ZSE6 113 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A18PA6NE21 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A16PA6NEW6 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A20PA6NIJ5 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A9PA6NNJ1 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A12PA8MX19 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A5PA8MXJ8 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 GPX5O75715 221 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A15PP0C7V4 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A13PP0C7W8 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A14PP0C7W9 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM90A24PP0C7X0 464 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 FAM106CPP0CH98 169 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 MADCAM1Q13477 382 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 HES1Q14469 280 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 HNF4GQ14541 408 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 MPV17LQ2QL34 196 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 KPRPQ5T749 579 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms