RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SLC25A35Q3KQZ1 300 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF404Q494X3 552 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RNF212Q495C1 297 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TIMM23BQ5SRD1 257 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SPATA46Q5T0L3 261 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 HES5Q5TA89 166 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SFXN4Q6P4A7 337 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 Q6ZRP5 223 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 C1orf122Q6ZSJ8 110 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RFPL4BQ6ZWI9 263 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PGAP1Q75T13 922 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 MRPL21Q7Z2W9 205 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 CROCCP3Q8IVE0 287 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SERPINA12Q8IW75 414 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 JAGN1Q8N5M9 183 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 Q8NBF4 154 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CCDC54Q8NEL0 328 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR1M1Q8NGA1 313 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR6Q1Q8NGQ2 317 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR13C9Q8NGT0 318 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 LILRB4Q8NHJ6 448 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF671Q8TAW3 534 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 AP3S1Q92572 193 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 APOBEC3DQ96AK3 386 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 CEP19Q96LK0 163 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF75AQ96N20 296 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 DACH2Q96NX9 599 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SLC30A2Q9BRI3 323 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 MMP27Q9H306 513 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RGCCQ9H4X1 137 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PLEKHA1Q9HB21 404 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PLGRKTQ9HBL7 147 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 KCNJ16Q9NPI9 418 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 COMMD3Q9UBI1 195 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF391Q9UJN7 358 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 FOXJ3Q9UPW0 622 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CMAHPQ9Y471 501 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PEX16Q9Y5Y5 336 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 V9GY05 133 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 V9GYS6 101 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SPTAN1Q13813 2472 aaKnown RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 CADP27708 2225 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 FASNP49327 2511 aaKnown RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 HIVEP3Q5T1R4 2406 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ROS1P08922 2347 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 A0A075B6Q4 140 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 IGHV2OR16-5A0A0B4J2B6 119 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ZNF816-ZNF321PA0A0X1KG74 233 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 hCG_38984A0A1B0GV85 526 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 LOC390937A0A1W2PQ73 354 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 NKX2-6A6NCS4 301 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 PGPEP1LA6NFU8 196 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 IFITM5A6NNB3 132 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 CD300LBA8K4G0 201 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 FAM25AB3EWG3 89 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 FAM25CB3EWG5 89 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 FAM25GB3EWG6 89 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 F5H0A9 414 aaPredicted RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 PHOX2AO14813 284 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 MAGEB3O15480 346 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 SULT1B1O43704 296 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 GMDSO60547 372 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 HPGDSO60760 199 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 SMPD2O60906 423 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 PAHP00439 452 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 NRASP01111 189 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 IGLV3-1P01715 115 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ERCC1P07992 297 aaPredicted RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 HCKP08631 526 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ZNF35P13682 527 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 IGFBP3P17936 291 aaPredicted RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 ADRA2CP18825 462 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ATF1P18846 271 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 PRKACBP22694 351 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 PAX7P23759 505 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ACKR3P25106 362 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 RAD52P43351 418 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 UCP2P55851 309 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 CLDN12P56749 244 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 FAM3AP98173 230 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 NAAAQ02083 359 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 SNTB1Q13884 538 aaKnown RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 GK2Q14410 553 aaPredicted RBP3.18□□□□□ -1.9
CLK4-207ENST00000520909 P2RY14Q15391 338 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 UBE2V2Q15819 145 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 RAB11BQ15907 218 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 MOGQ16653 247 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 DMRTC1Q5HYR2 192 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 CLVS2Q5SYC1 327 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 C1QTNF12Q5T7M4 302 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 DDI2Q5TDH0 399 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 PLCXD3Q63HM9 321 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 GLT8D1Q68CQ7 371 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ASPHD2Q6ICH7 369 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 OR2T2Q6IF00 324 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 Q6ZSR3 168 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 ZNF101Q8IZC7 436 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 OR5AS1Q8N127 324 aa3.18□□□□□ -1.9
CLK4-207ENST00000520909 SAMD12Q8N8I0 201 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms