RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SPIN3Q5JUX0 258 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 ASCL4Q6XD76 172 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 Q8NFD4 153 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR11H6Q8NGC7 330 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR51A2Q8NGJ7 313 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR5D18Q8NGL1 313 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR5R1Q8NH85 324 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 CHPT1Q8WUD6 406 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 CYGBQ8WWM9 190 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 CORO2AQ92828 525 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM80Q96HE8 168 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 CITED1Q99966 193 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 COMMD4Q9H0A8 199 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 RHOFQ9HBH0 211 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 PLCXD1Q9NUJ7 323 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 GLS2Q9UI32 602 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 VPREB3Q9UKI3 123 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 DHDHQ9UQ10 334 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 hADV38S2A0JD32 116 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 BTBD17A6NE02 478 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ODF3BA8MYP8 253 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 F8W036 122 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 H3BUX3 64 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 SIRPB1O00241 398 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 DEGS1O15121 323 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 RBP4P02753 201 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ALDOBP05062 364 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 GNAO1P09471 354 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 OCM2P0CE71 109 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 OCMP0CE72 109 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-215ENST00000519474 CGB3P0DN86 165 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 CGB7P0DN87 165 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 KIR2DS4P43632 304 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 GLIPR1P48060 266 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 LGALS4P56470 323 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 SCN1BQ07699 218 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 AESQ08117 197 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ST3GAL4Q11206 333 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 EDDM3AQ14507 147 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 LY6EQ16553 131 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 OGFRL1Q5TC84 451 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF626Q68DY1 528 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 DMKNQ6E0U4 476 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 SLC25A24Q6NUK1 477 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 BAIAP2L2Q6UXY1 529 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 TMPRSS11AQ6ZMR5 421 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 PXT1Q8NFP0 134 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 OR13D1Q8NGV5 346 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 HAVCR2Q8TDQ0 301 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 GPR148Q8TDV2 347 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 CAPSLQ8WWF8 208 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 PHF21AQ96BD5 680 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ORAI1Q96D31 301 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF714Q96N38 554 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 PPA2Q9H2U2 334 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ZC4H2Q9NQZ6 224 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 FBLN5Q9UBX5 448 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF281Q9Y2X9 895 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 EXOSC1Q9Y3B2 195 aaKnown RBP7.56□□□□□ -1.2
HDAC3-215ENST00000519474 LINC00312Q9Y6C7 94 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 HSPE1-MOB4S4R3N1 261 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 DSCAML1Q8TD84 2053 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
HDAC3-215ENST00000519474 IRGMA1A4Y4 181 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SLC33A1O00400 549 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SLC25A17O43808 307 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 XPNPEP2O43895 674 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 GPX5O75715 221 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 ARG1P05089 322 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 HCKP08631 526 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 RAB3AP20336 220 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 GDNFP39905 211 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 CAPGP40121 348 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 PRRX1P54821 245 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 RPS11P62280 158 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SSX2Q16385 188 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 LRRC75BQ2VPJ9 315 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SATL1Q86VE3 508 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SETD9Q8NE22 299 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 OR51T1Q8NGJ9 327 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 TSEN15Q8WW01 171 aaKnown RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 GHSRQ92847 366 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 NKX3-1Q99801 234 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 TAS2R4Q9NYW5 299 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 NKX1-2Q9UD57 310 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 PSORS1C1Q9UIG5 152 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 UBE2J1Q9Y385 318 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
HDAC3-215ENST00000519474 KIAA2026Q5HYC2 2103 aa7.55□□□□□ -1.2
HDAC3-215ENST00000519474 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 GABRPO00591 440 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF44P15621 663 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 CPEP16870 476 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms