RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
CLN8-204ENST00000519254 UBR5O95071 2799 aaPredicted RBP12.19□□□□□ -0.46
CLN8-204ENST00000519254 TRBV6-6A0A0A6YYG2 114 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 SLC33A1O00400 549 aaPredicted RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 WNT9BO14905 357 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 RGS13O14921 159 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 CLDN1O95832 211 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 OR2H2O95918 312 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 IGHV1-46P01743 117 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 PGAM2P15259 253 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 ZNF44P15621 663 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 RPS2P15880 293 aaKnown RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 HLA-GP17693 338 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 FCGR2CP31995 323 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 ECI1P42126 302 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 IGSF11Q5DX21 431 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 MUC15Q8N387 334 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 OR5M8Q8NGP6 311 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 PHB2Q99623 299 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 FLNCQ14315 2725 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 DBX1A6NMT0 343 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 SIRPB1O00241 398 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 SFT2D2O95562 160 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 RBMXP38159 391 aaKnown RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 HOXA4Q00056 320 aaPredicted RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 SRSF4Q08170 494 aaKnown RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 MZT1Q08AG7 82 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 RBM39Q14498 530 aaKnown RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 LGALSLQ3ZCW2 172 aaPredicted RBP12.18□□□□□ -0.46
CLN8-204ENST00000519254 SPRNQ5BIV9 151 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 KIAA2026Q5HYC2 2103 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 CLEC18BQ6UXF7 455 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 ITLN1Q8WWA0 313 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 FXYD6Q9H0Q3 95 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 ZDHHC8Q9ULC8 765 aa12.18□□□□□ -0.46
CLN8-204ENST00000519254 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 DOPEY1Q5JWR5 2465 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 hCG_1807616A0A1W2PRN6 198 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 B9A039 149 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 SH2D1BO14796 132 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 CTSDP07339 412 aaPredicted RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 SCTP09683 121 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 TNFSF4P23510 183 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 CD200P41217 278 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 CCL8P80075 99 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 EFNB3Q15768 340 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 PAN3Q58A45 887 aaKnown RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 ASCC1Q8N9N2 400 aaKnown RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 MEGF10Q96KG7 1140 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 UBTD1Q9HAC8 227 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
CLN8-204ENST00000519254 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
CLN8-204ENST00000519254 ROS1P08922 2347 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 TRDCB7Z8K6 153 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 CCSO14618 274 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 KNG1P01042 644 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 ZNF728P0DKX0 622 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
CLN8-204ENST00000519254 HERPUD1Q15011 391 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 SLC9A3R2Q15599 337 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 ACP7Q6ZNF0 438 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 MOGAT3Q86VF5 341 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 MOB3AQ96BX8 217 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
CLN8-204ENST00000519254 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 RGS11O94810 467 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 HAND1O96004 215 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 AADACP22760 399 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 GLP1RP43220 463 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 SHEQ5VZ18 495 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 GAPTQ8N292 157 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 TOMM40LQ969M1 308 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 GON7Q9BXV9 100 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 CLEC4MQ9H2X3 399 aaPredicted RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 SLA2Q9H6Q3 261 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms