RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 GFI1Q99684 422 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CHCHD6Q9BRQ6 235 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PIMREGQ9BSJ6 248 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 URM1Q9BTM9 101 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CENPOQ9BU64 300 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 TMEM59Q9BXS4 323 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FAM192AQ9GZU8 254 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NXF2Q9GZY0 626 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NAA50Q9GZZ1 169 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FAM234AQ9H0X4 552 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 OR51E2Q9H255 320 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PPIL3Q9H2H8 161 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 LIME1Q9H400 295 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NCOR1P1Q9H4R4 102 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PPP1R3EQ9H7J1 279 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ZNF665Q9H7R5 613 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PATZ1Q9HBE1 687 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 HMG20AQ9NP66 347 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 RBFOX1Q9NWB1 397 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 C1orf123Q9NWV4 160 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 TREM2Q9NZC2 230 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MTCH1Q9NZJ7 389 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CCDC59Q9P031 241 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ABRACLQ9P1F3 81 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 C11orf21Q9P2W6 132 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NLKQ9UBE8 527 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MIOXQ9UGB7 285 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 RSL24D1Q9UHA3 163 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 HSF4Q9ULV5 492 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SPATA2Q9UM82 520 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MRPS28Q9Y2Q9 187 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PPIAL4AQ9Y536 164 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ETV7Q9Y603 341 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CEPT1Q9Y6K0 416 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 DSCAMO60469 2012 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ZNF469Q96JG9 3925 aaPredicted RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NOTCH2Q04721 2471 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 HEATR1Q9H583 2144 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ABCA12Q86UK0 2595 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 VPS13CQ709C8 3753 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FLNBO75369 2602 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ARID1AO14497 2285 aa1.82□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CACNA1DQ01668 2161 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 IGKV1D-17A0A075B6S4 117 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 IGHV4-30-2A0A087WSY4 118 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 TRBV6-6A0A0A6YYG2 114 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 IGHV4-61A0A0C4DH41 118 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 LOC100506127A0A0U1RQW1 187 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 TMEM272A0A1B0GTI8 110 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 A0A1W2PPK0 400 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FUOMA2VDF0 154 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 METTL21EPA6NDL7 271 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 A6NIN4 97 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SH2D7A6NKC9 451 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 OR2AT4A6NND4 320 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FOXI3A8MTJ6 420 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SERPINE3A8MV23 424 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 B4DSR2 109 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 H3BSH0 61 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 J3QLI3 93 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 K7N7A8 449 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SLC33A1O00400 549 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MFNGO00587 321 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 RRHO14718 337 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SH2D1BO14796 132 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 TSPAN4O14817 238 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 WNT9BO14905 357 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PPIHO43447 177 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SPRY1O43609 319 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ENSAO43768 121 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ANGPTL7O43827 346 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 SSX4O60224 188 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PDCD6O75340 191 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PROP1O75360 226 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 FOXH1O75593 365 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 LY6HO94772 140 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 NXPH2O95156 264 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CDRT1O95170 752 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ECDO95905 644 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 OR2H2O95918 312 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 HAND1O96004 215 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CYB5R3P00387 301 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 APOA1P02647 267 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 RBP4P02753 201 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 LIPFP07098 398 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MELTFP08582 738 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 WNT2P09544 360 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CSF1P09603 554 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 LYL1P12980 280 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 RPS2P15880 293 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 HIST1H1DP16402 221 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 MGMTP16455 207 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ZNF182P17025 639 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 PRKACAP17612 351 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 BCL3P20749 454 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 USF1P22415 310 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 COL8A2P25067 703 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 CHATP28329 748 aa1.81□□□□□ -2.12
SCARNA16.3-201ENST00000516595 ETV6P41212 452 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms