RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	FRRS1L	Q9P0K9	344 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	IGHV1-3	A0A0C4DH29	117 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	TCRBV3S1	A0A5B6	114 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	LY86	O95711	162 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	GAPDH	P04406	335 aa	Known RBP	12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	DBT	P11182	482 aa	Known RBP	12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	INSL3	P51460	131 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	ZNF85	Q03923	595 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	FHL3	Q13643	280 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	DOC2B	Q14184	412 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	IZUMO1	Q8IYV9	350 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459		Q8N6K4	173 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	OR10A7	Q8NGE5	316 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	OR13C3	Q8NGS6	347 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	OR2T10	Q8NGZ9	312 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	MRGPRD	Q8TDS7	321 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	UTP4	Q969X6	686 aa	Known RBP	12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	ENOPH1	Q9UHY7	261 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	MYRF	Q9Y2G1	1151 aa		12.32	□□□□□ -0.44
LMNA-223	ENST00000515459	IGHV3-72	A0A0B4J1Y9	119 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459		A0A1W2PPE3	182 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	IGHG4	P01861	327 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	TMEM225B	P0DP42	221 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	LYL1	P12980	280 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	REG1B	P48304	166 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	MTNR1B	P49286	362 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	GYS2	P54840	703 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	TMED1	Q13445	227 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	SBSPON	Q8IVN8	264 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459		Q8N9W7	124 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	OR11H1	Q8NG94	326 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	OR51A4	Q8NGJ6	313 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	CNIH3	Q8TBE1	160 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	NR1H4	Q96RI1	486 aa	Predicted RBP	12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	ZCCHC4	Q9H5U6	513 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	PALMD	Q9NP74	551 aa		12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.31	□□□□□ -0.44
LMNA-223	ENST00000515459	TRAV24	A0A0B4J272	114 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	LCE6A	A0A183	80 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459		G3V2T6	193 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	HCK	P08631	526 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	VDAC1	P21796	283 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	SSTR5	P35346	364 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	NANOS3	P60323	173 aa	Known RBP	12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	ZP1	P60852	638 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	PAX5	Q02548	391 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	CFHR3	Q02985	330 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	KISS1	Q15726	138 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	RSBN1	Q5VWQ0	802 aa	Predicted RBP	12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	KDM4D	Q6B0I6	523 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	ELP2	Q6IA86	826 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	FDX2	Q6P4F2	183 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	KCTD20	Q7Z5Y7	419 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	OR10AC1	Q8NH08	325 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	RFK	Q969G6	155 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	RASL11B	Q9BPW5	248 aa		12.3	□□□□□ -0.44
LMNA-223	ENST00000515459	HTR1A	P08908	422 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	PSMB8	P28062	276 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	KCNJ3	P48549	501 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	CCR9	P51686	369 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	FAM27D1	Q5T7N8	215 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	OR8J1	Q8NGP2	316 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	PLPPR1	Q8TBJ4	325 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	EME1	Q96AY2	570 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	S1PR3	Q99500	378 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	PLSCR3	Q9NRY6	295 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	FAM118A	Q9NWS6	357 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	GAR1	Q9NY12	217 aa	Known RBP	12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	SORL1	Q92673	2214 aa		12.29	□□□□□ -0.44
LMNA-223	ENST00000515459	DNAH7	Q8WXX0	4024 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	ATP8B1	O43520	1251 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	MOS	P00540	346 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	OR8U8	P0C7N1	319 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	CD1B	P29016	333 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	SOX6	P35712	828 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	OR8H1	Q8NGG4	311 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	OR5D14	Q8NGL3	314 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	HSPB9	Q9BQS6	159 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	POMP	Q9Y244	141 aa		12.28	□□□□□ -0.44
LMNA-223	ENST00000515459	TRAV39	A0A0B4J263	110 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	SLC16A6	O15403	523 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	SULT1B1	O43704	296 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	OR5H8	P0DN80	308 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	GZMH	P20718	246 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	IL13RA2	Q14627	380 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	ZSCAN26	Q16670	478 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	ZNF691	Q5VV52	312 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	OVCH2	Q7RTZ1	564 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	ZNF429	Q86V71	674 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	ZDHHC13	Q8IUH4	622 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	SERPINA12	Q8IW75	414 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	FAM71E2	Q8N5Q1	922 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	LINC00311	Q8N616	119 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	TMEM104	Q8NE00	496 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	PXT1	Q8NFP0	134 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	OR1N2	Q8NGR9	330 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	KCTD7	Q96MP8	289 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	GABARAPL1	Q9H0R8	117 aa		12.27	□□□□□ -0.45
LMNA-223	ENST00000515459	ZMAT4	Q9H898	229 aa		12.27	□□□□□ -0.45

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