RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RAB3BP20337 219 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 FUT3P21217 361 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 SAA4P35542 130 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 GLP1RP43220 463 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 C2orf76Q3KRA6 126 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 Q6YL49 198 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 OR13A1Q8NGR1 328 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 OR13D1Q8NGV5 346 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 RCC2Q9P258 522 aaKnown RBP11.37□□□□□ -0.59
USP46-209ENST00000514536 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 UBE2QL1A1L167 161 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 SMIM30A4D0T7 59 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 ZNF729A6NN14 1252 aaPredicted RBP11.37□□□□□ -0.59
USP46-209ENST00000514536 CLPXO76031 633 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 CGB3P0DN86 165 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 CGB7P0DN87 165 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 OMGP23515 440 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 CDK2P24941 298 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 RPS27AP62979 156 aaKnown RBP11.37□□□□□ -0.59
USP46-209ENST00000514536 PAX5Q02548 391 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
USP46-209ENST00000514536 C17orf58Q2M2W7 97 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 PRAMEF5Q5TYX0 476 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 OR2W3Q7Z3T1 314 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 MRGPRDQ8TDS7 321 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 C17orf50Q8WW18 174 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 FAM3DQ96BQ1 224 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 NICN1Q9BSH3 213 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 RNF167Q9H6Y7 350 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 TNFRSF19Q9NS68 423 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 STEAP1Q9UHE8 339 aa11.37□□□□□ -0.59
USP46-209ENST00000514536 STAB1Q9NY15 2570 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 KBTBD11-OT1A0A1B0GTJ5 212 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 TMEM30CPA0ZSE6 113 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 TRIM64CA6NLI5 447 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 IFITM5A6NNB3 132 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
USP46-209ENST00000514536 MT-ND4P03905 459 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 MELTFP08582 738 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 JUNBP17275 347 aaPredicted RBP11.36□□□□□ -0.59
USP46-209ENST00000514536 GDNFP39905 211 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 LGALS4P56470 323 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
USP46-209ENST00000514536 DYNC1I2Q13409 638 aaKnown RBP11.36□□□□□ -0.59
USP46-209ENST00000514536 SLC9A3R2Q15599 337 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 MIDNQ504T8 468 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 NKAPLQ5M9Q1 402 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 BAIAP2L2Q6UXY1 529 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 HEPN1Q6WQI6 88 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 NR2C2APQ86WQ0 139 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 NEDD4LQ96PU5 975 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 TM2D1Q9BX74 207 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 TMEM133Q9H2Q1 129 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
USP46-209ENST00000514536 H3BUI4 141 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 PDCD6O75340 191 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 PAHP00439 452 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 ARG1P05089 322 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 GLAP06280 429 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 FBP1P09467 338 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 RANBP1P43487 201 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 RFESDQ8TAC1 157 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 ZFAND2BQ8WV99 257 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 DYRK2Q92630 601 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 AJUBAQ96IF1 538 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 KCTD7Q96MP8 289 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 URM1Q9BTM9 101 aaKnown RBP11.35□□□□□ -0.59
USP46-209ENST00000514536 CENPOQ9BU64 300 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 LPAR5Q9H1C0 372 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 CALYQ9NYX4 217 aa11.35□□□□□ -0.59
USP46-209ENST00000514536 A0A0A6YYD4 124 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 A0A0B4J203 849 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 FAM172BPA6NC97 362 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 AIPO00170 330 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 SLC2A2P11168 524 aaPredicted RBP11.34□□□□□ -0.59
USP46-209ENST00000514536 GZMHP20718 246 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 NFYBP25208 207 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 CHATP28329 748 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 BLVRBP30043 206 aaPredicted RBP11.34□□□□□ -0.59
USP46-209ENST00000514536 SDC2P34741 201 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 LHFPL4Q7Z7J7 247 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 ABHD12Q8N2K0 398 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.34□□□□□ -0.59
USP46-209ENST00000514536 OR4K15Q8NH41 348 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 YIPF6Q96EC8 236 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms