RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 HS3ST1O14792 307 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 FGF5P12034 268 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TLE1Q04724 770 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 OR8B8Q15620 311 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 MYPOPQ86VE0 399 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 C17orf78Q8N4C9 275 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 FGF23Q9GZV9 251 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 C11orf1Q9H5F2 150 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 WDR54Q9H977 334 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 DOK5Q9P104 306 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 A0A0G2JRQ6 117 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 PITX3O75364 302 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 S100PP25815 95 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 PMELP40967 661 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 ERVFRD-1P60508 538 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 RAB2AP61019 212 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 PRDX4Q13162 271 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 COL19A1Q14993 1142 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 HIKESHIQ53FT3 197 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 C9orf152Q5JTZ5 239 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 Q8WTZ3 238 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 IL1F10Q8WWZ1 152 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TOLLIPQ9H0E2 274 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 Q9N2K0 584 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 IGKV1-6A0A0C4DH72 117 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 C5orf49A4QMS7 147 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF732B4DXR9 585 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 SCAF4O95104 1147 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 VDAC1P21796 283 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 SRD5A2P31213 254 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 ICAM4Q14773 271 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 CDPF1Q6NVV7 123 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 LCN15Q6UWW0 184 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 OR2V1Q8NHB1 315 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TMEM56Q96MV1 263 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 GGACTQ9BVM4 153 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TMPRSS5Q9H3S3 457 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 KIAA1456Q9P272 454 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 ZMAT5Q9UDW3 170 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TMEM56-RWDD3S4R434 201 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 ZFP92A6NM28 416 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 NGFP01138 241 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 GDF1P27539 372 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PCBD1P61457 104 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SRPXP78539 464 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 ARF1P84077 181 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PRR18Q8N4B5 295 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 OR2Y1Q8NGV0 311 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SIGLEC12Q96PQ1 595 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 IL36GQ9NZH8 169 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MTCH1Q9NZJ7 389 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PATE3B3GLJ2 98 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PPIHO43447 177 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SYNGR1O43759 233 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PLA2G5P39877 138 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 RAB11AP62491 216 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 ID3Q02535 119 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MPV17LQ2QL34 196 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 M1APQ8TC57 530 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 NIPSNAP3BQ9BS92 247 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 RSG1Q9BU20 258 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SH2D2AQ9NP31 389 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 DEPPQ9NTK1 212 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 C4orf17Q53FE4 359 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 C20orf204Q6ZNR8 217 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MALSU1Q96EH3 234 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PRRG4Q9BZD6 226 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 CALHM2Q9HA72 323 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 KIAA2026Q5HYC2 2103 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 GPR179Q6PRD1 2367 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 IGHV3-64DA0A0J9YX35 117 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MRPL33O75394 65 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MMP7P09237 267 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MDKP21741 143 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PAX9P55771 341 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 STARD6P59095 220 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 IL11RAQ14626 422 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 NMSQ5H8A3 153 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 GFI1BQ5VTD9 330 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SPNS3Q6ZMD2 512 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 MRPL21Q7Z2W9 205 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 SGCZQ96LD1 299 aa7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 UNKLQ9H9P5 680 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 ERRFI1Q9UJM3 462 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-215ENST00000512632 PINLYPA6NC86 204 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 IFITM10A6NMD0 228 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 CYB5BO43169 146 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 TRGC2P03986 189 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 IAPPP10997 89 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF16P17020 682 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 FOLR3P41439 243 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 FGF8P55075 233 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 ELOBQ15370 118 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 PYY3Q5JQD4 70 aa7.92□□□□□ -1.14
LIMCH1-215ENST00000512632 MKXQ8IYA7 352 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms