RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 LRRC18Q8N456 261 aa11.96□□□□□ -0.49
SNCAIP-217ENST00000512385 SLC35G3Q8N808 338 aa11.96□□□□□ -0.49
SNCAIP-217ENST00000512385 PROK2Q9HC23 129 aa11.96□□□□□ -0.49
SNCAIP-217ENST00000512385 ANXA10Q9UJ72 324 aa11.96□□□□□ -0.49
SNCAIP-217ENST00000512385 STRAPQ9Y3F4 350 aaKnown RBP11.96□□□□□ -0.49
SNCAIP-217ENST00000512385 A0A1W2PNR3 127 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 NKX2-6A6NCS4 301 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 ST8SIA3O43173 380 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 ZNF728P0DKX0 622 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 RAB11AP62491 216 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 OR2AJ1Q8NGZ0 328 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 TP53RKQ96S44 253 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 NIPSNAP3BQ9BS92 247 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 NAA60Q9H7X0 242 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 SLC2A9Q9NRM0 540 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 GLRX2Q9NS18 164 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 B3GAT1Q9P2W7 334 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.5
SNCAIP-217ENST00000512385 SMCO3A2RU48 225 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 A6NIZ1 184 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 SSSCA1O60232 199 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 GZMBP10144 247 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 SFTPDP35247 375 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 GLIPR1P48060 266 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 NUBP1P53384 320 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 RAP1BP61224 184 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 PRSS8Q16651 343 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 CXorf66Q5JRM2 361 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 FAM180AQ6UWF9 173 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 OR5C1Q8NGR4 320 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 ZPBPQ9BS86 351 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 TPRP12270 2363 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 IL18BPO95998 194 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 LIFP15018 202 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 RPL23AP62750 156 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 EXT1Q16394 746 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 NECAP1Q8NC96 275 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 HAS2Q92819 552 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 NEU1Q99519 415 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 PTPRBP23467 1997 aa11.95□□□□□ -0.5
SNCAIP-217ENST00000512385 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 A8MWP6 167 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 PROB1E7EW31 1015 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 TMEM50AO95807 157 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 RFPL3SP0C7P2 107 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 NR2C1P13056 603 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 SSR4P51571 173 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 CLRN1P58418 232 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 SPCS3P61009 180 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 C17orf67Q0P5P2 114 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 EIF3IQ13347 325 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 HNF4GQ14541 408 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 H3BP45 60 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 MLF1P58340 268 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 DCAF10Q5QP82 559 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 BCO1Q9HAY6 547 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 CHST11Q9NPF2 352 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
SNCAIP-217ENST00000512385 PINLYPA6NC86 204 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 M1APQ8TC57 530 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 SIGLEC12Q96PQ1 595 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 HLA-HP01893 362 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 AMBPP02760 352 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 COX5BP10606 129 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 DUSP1P28562 367 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 DYNLT3P51808 116 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 ZNF154Q13106 437 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 ESPL1Q14674 2120 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 SLC22A25Q6T423 547 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 LFNGQ8NES3 379 aa11.93□□□□□ -0.5
SNCAIP-217ENST00000512385 CLDND2Q8NHS1 167 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms