RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MYO15BQ96JP2 1530 aa1.5□□□□□ -2.17
CHD1-207ENST00000511628 POLR3AO14802 1390 aaPredicted RBP1.49□□□□□ -2.17
CHD1-207ENST00000511628 LTBP4Q8N2S1 1624 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 TRAV8-2A0A0B4J237 113 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 A6NED7 52 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 TMEM250H0YL14 139 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 I3L4J1 428 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 J3QLI3 93 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 GPR171O14626 319 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 MPZL2O60487 215 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 CPSF4O95639 269 aaKnown RBP1.49□□□□□ -2.17
CHD1-207ENST00000511628 SNAP29O95721 258 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 IGHV3-53P01767 116 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 LIMS3P0CW19 117 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 LIMS4P0CW20 117 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 CTLA4P16410 223 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 ELK4P28324 431 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 PYCR1P32322 319 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 SPAM1P38567 509 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 PSMD7P51665 324 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 MEF2BQ02080 365 aaPredicted RBP1.49□□□□□ -2.17
CHD1-207ENST00000511628 DHRS2Q13268 280 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 BIKQ13323 160 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 IHHQ14623 411 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 USF2Q15853 346 aaPredicted RBP1.49□□□□□ -2.17
CHD1-207ENST00000511628 ZNF141Q15928 474 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 FAM162BQ5T6X4 162 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 XKRXQ6PP77 449 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 PAGE2Q7Z2X7 111 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 ZNF738Q8NE65 137 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 DDIT4LQ96D03 193 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 IGF2BP2-AS1Q96M15 143 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 TM2D3Q9BRN9 247 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 EBPLQ9BY08 206 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 OR2D2Q9H210 308 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 DUSP21Q9H596 190 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 METTL8Q9H825 291 aaKnown RBP1.49□□□□□ -2.17
CHD1-207ENST00000511628 SPACA1Q9HBV2 294 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 FADS3Q9Y5Q0 445 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 TRAPPC1Q9Y5R8 145 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 SDK2Q58EX2 2172 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 SSH2Q76I76 1423 aa1.49□□□□□ -2.17
CHD1-207ENST00000511628 TMEM94Q12767 1356 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 COL5A1P20908 1838 aaPredicted RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 GOLGA8IPA6NC78 632 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 OR5H14A6NHG9 310 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 TRPC5OSA6NMA1 111 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 LEUTXA8MZ59 168 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 GGTLC3B5MD39 225 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 CRXO43186 299 aaPredicted RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 FGF16O43320 207 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 SCN2BO60939 215 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 PSIP1O75475 530 aaKnown RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 POP7O75817 140 aaKnown RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 ZNF708P17019 499 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 CASQ1P31415 396 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 MP68P56378 58 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 C1QTNF8P60827 252 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 RAB2AP61019 212 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 ANGPT1Q15389 498 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 SYCP1Q15431 976 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 PYDC2Q56P42 97 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 OLIG3Q7RTU3 272 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 COMTD1Q86VU5 262 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 MUC15Q8N387 334 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 EIF4E3Q8N5X7 224 aaKnown RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 ATP6V1G3Q96LB4 118 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 TMEM56Q96MV1 263 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 HBEGFQ99075 208 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 PKMYT1Q99640 499 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 MED10Q9BTT4 135 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 SLC19A3Q9BZV2 496 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 FBXL3Q9UKT7 428 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 OR51B4Q9Y5P0 310 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 ARAP3Q8WWN8 1544 aa1.48□□□□□ -2.17
CHD1-207ENST00000511628 DNMT1P26358 1616 aaKnown RBP1.48□□□□□ -2.17
CHD1-207ENST00000511628 KIAA0232Q92628 1395 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 RAB3GAP2Q9H2M9 1393 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 ERICH2A1L162 156 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 PDYNP01213 254 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 MLNP12872 115 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 PSMB9P28065 219 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 KDELR2P33947 212 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 TAF9Q16594 264 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 TMEM249Q2WGJ8 235 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 LGALSLQ3ZCW2 172 aaPredicted RBP1.47□□□□□ -2.17
CHD1-207ENST00000511628 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 RPRMLQ8N4K4 120 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 C3orf22Q8N5N4 141 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 Q8NAQ8 132 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 ACBD4Q8NC06 268 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 OR11G2Q8NGC1 345 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 OR11L1Q8NGX0 322 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 ZNRF2Q8NHG8 242 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 ANGPTL6Q8NI99 470 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 DYNC2LI1Q8TCX1 351 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 CASTOR1Q8WTX7 329 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 TRIB3Q96RU7 358 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 POTEKPQ9BYX7 375 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms