RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IGKV1D-17A0A075B6S4 117 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 TRAV38-1A0A0B4J264 116 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 OR5H14A6NHG9 310 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 ERP29P30040 261 aaKnown RBP12.75□□□□□ -0.37
SCLT1-209ENST00000511426 OR3A1P47881 315 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 NPY4RP50391 375 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 GMFBP60983 142 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 CCL8P80075 99 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
SCLT1-209ENST00000511426 HMGN3Q15651 99 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 KCNJ8Q15842 424 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 CD177Q8N6Q3 437 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 SEC22CQ9BRL7 303 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 CBLN4Q9NTU7 201 aa12.75□□□□□ -0.37
SCLT1-209ENST00000511426 COL6A6A6NMZ7 2263 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 TUSC2O75896 110 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 ZBTB25P24278 435 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 FCGR2CP31995 323 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 HERV-K104P61576 105 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 DHRS2Q13268 280 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 ATXN7L3Q14CW9 347 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 FCN2Q15485 313 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 FAM185AQ8N0U4 392 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 ASCC1Q8N9N2 400 aaKnown RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 LURAP1Q96LR2 239 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 SHARPINQ9H0F6 387 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF665Q9H7R5 613 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 KLF2Q9Y5W3 355 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-209ENST00000511426 CADP27708 2225 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 HCFC1P51610 2035 aa12.74□□□□□ -0.37
SCLT1-209ENST00000511426 MEIKINA0A087WXM9 373 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 K7N7A8 449 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 LGALS8O00214 317 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 NDUFA2O43678 99 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PLAUP00749 431 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PPYP01298 95 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PGAM2P15259 253 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 IL13RA1P78552 427 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 MRPS11P82912 194 aaKnown RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 MUC20Q8N307 709 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF843Q8N446 348 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 OR10J5Q8NHC4 309 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PHB2Q99623 299 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 TMEM106BQ9NUM4 274 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PCNX1Q96RV3 2341 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 C9orf170A2RU37 121 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 TMEM178BH3BS89 294 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 SCTP09683 121 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF728P0DKX0 622 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 GABRA2P47869 451 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 CEBPDP49716 269 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 KRBOX4Q5JUW0 171 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 C12orf45Q8N5I9 185 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 OR11H7Q8NGC8 314 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 COQ2Q96H96 371 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 RTBDNQ9BSG5 229 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-209ENST00000511426 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 FXYD6Q9H0Q3 95 aa12.73□□□□□ -0.37
SCLT1-209ENST00000511426 PPIAL4EA0A075B759 164 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 PIGBOS1A0A0B4J2F0 54 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 FAM172BPA6NC97 362 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 PPIAL4DF5H284 164 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 GIPP09681 153 aaPredicted RBP12.72□□□□□ -0.37
SCLT1-209ENST00000511426 PPIAL4FP0DN26 164 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 HLA-GP17693 338 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 GZMHP20718 246 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 CD83Q01151 205 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 PPP1R1AQ13522 171 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 ZFP69Q49AA0 526 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 IGSF11Q5DX21 431 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
SCLT1-209ENST00000511426 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
SCLT1-209ENST00000511426 DLL4Q9NR61 685 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 OR6C3Q9NZP0 311 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms