RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 V9GY05 133 aa8.64□□□□□ -1.03
POLR2J3-213ENST00000508848 TMEM89A2RUT3 159 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 RNF212BA8MTL3 300 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 ODF3BA8MYP8 253 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 MCRIP1C9JLW8 97 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 MT-ND4P03905 459 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 MELTFP08582 738 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 VSIG8P0DPA2 414 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 CCL3L1P16619 93 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 JUNBP17275 347 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 SERPINA2P20848 420 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 CALRP27797 417 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 SAA4P35542 130 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 DYNLT3P51808 116 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 RPS27AP62979 156 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 TAF9Q16594 264 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 TRAT1Q6PIZ9 186 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 C8orf31Q8N9H6 132 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 TMEM104Q8NE00 496 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 OR10K1Q8NGX5 313 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 OR5R1Q8NH85 324 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 DYRK2Q92630 601 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 NR1H4Q96RI1 486 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 TMEM133Q9H2Q1 129 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 HSF4Q9ULV5 492 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 STUB1Q9UNE7 303 aa8.63□□□□□ -1.03
POLR2J3-213ENST00000508848 A0A1B0GUS0 222 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 TMEM30CPA0ZSE6 113 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 OOSP1A8MZH6 123 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 PDCD6O75340 191 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 CLPXO76031 633 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 IGLV1-47P01700 117 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 HKR1P10072 659 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 CALCBP10092 127 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 ARSBP15848 533 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 LGALS4P56470 323 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 SCAND1P57086 179 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 EDDM3AQ14507 147 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 LY6G6FQ5SQ64 297 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 STEAP3Q658P3 488 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 SIGIRRQ6IA17 410 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 TSPAN14Q8NG11 270 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 ZNF596Q8TC21 504 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 GFI1Q99684 422 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 C19orf24Q9BVV8 132 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 CLEC7AQ9BXN2 247 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 TMEM59Q9BXS4 323 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 SELENOIQ9C0D9 397 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 RIMS4Q9H426 269 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 VCX3AQ9NNX9 186 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 ZNRD1Q9P1U0 126 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 SSR3Q9UNL2 185 aa8.62□□□□□ -1.03
POLR2J3-213ENST00000508848 MEIKINA0A087WXM9 373 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 TRBV6-6A0A0A6YYG2 114 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 A0A0U1RQK1 487 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 A0A1W2PP11 408 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 MEIOCA2RUB1 952 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 IFITM5A6NNB3 132 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 CRTAPO75718 401 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 IL1AP01583 271 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB3BP20337 219 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB6AP20340 208 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 MYL9P24844 172 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 CDK2P24941 298 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 PSMB9P28065 219 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 PRRX1P54821 245 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 SNU13P55769 128 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 FOXL1Q12952 345 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 C2orf76Q3KRA6 126 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 TIMM50Q3ZCQ8 353 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 RUSC1-AS1Q66K80 236 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 FAM3DQ96BQ1 224 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 PLGRKTQ9HBL7 147 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 TXNL4BQ9NX01 149 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 STEAP1Q9UHE8 339 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 KIF25Q9UIL4 384 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB22AQ9UL26 194 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 PEX16Q9Y5Y5 336 aa8.61□□□□□ -1.03
POLR2J3-213ENST00000508848 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 IGHV2-26A0A0B4J1V2 119 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 AIPO00170 330 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 F2RL2O00254 374 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 NDUFA7O95182 113 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 PAHP00439 452 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 HTR1DP28221 377 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 CHATP28329 748 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 UNC119Q13432 240 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 ARL6IP1Q15041 203 aa8.6□□□□□ -1.03
POLR2J3-213ENST00000508848 RAB11BQ15907 218 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms