RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CPMP14384 443 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 ATP6V1C1P21283 382 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 TMED10P49755 219 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 SKP1P63208 163 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 CBX1P83916 185 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 PLCXD2Q0VAA5 305 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 MAD2L1BPQ15013 274 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 GABRA6Q16445 453 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 HADHQ16836 314 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 TMEM225Q6GV28 225 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 NIPAL1Q6NVV3 410 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 UGT2A3Q6UWM9 527 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 ST13P4Q8IZP2 240 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 BBOF1Q8ND07 529 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 OR4K17Q8NGC6 315 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 OR52E4Q8NGH9 312 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 CD200R1Q8TD46 325 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 VAT1Q99536 393 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 GPR21Q99679 349 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF717Q9BY31 904 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 MRPL37Q9BZE1 423 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 STMN4Q9H169 189 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 LYRM4Q9HD34 91 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 CHRAC1Q9NRG0 131 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 TREX1Q9NSU2 369 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 DCAF16Q9NXF7 216 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 FAT1Q14517 4588 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF816-ZNF321PA0A0X1KG74 233 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 METTL21EPA6NDL7 271 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 OR6C70A6NIJ9 312 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 H7C0C1 242 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 FADS1O60427 444 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 GABARAPO95166 117 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 GPR75O95800 540 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 BCHEP06276 602 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 CECR9P0C854 216 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 MPC1LP0DKB6 136 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 HIST1H1TP22492 207 aaPredicted RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 ATP5OP48047 213 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 TTPAP49638 278 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 GINS1Q14691 196 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 TPD52L1Q16890 204 aaPredicted RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 ATP6AP1LQ52LC2 224 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 HIKESHIQ53FT3 197 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 SPRNQ5BIV9 151 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 FBXO48Q5FWF7 155 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 HBMQ6B0K9 141 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF470Q6ECI4 717 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 MARCH3Q86UD3 253 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 NUDCD3Q8IVD9 361 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 RPP25LQ8N5L8 163 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 WFDC9Q8NEX5 89 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 ACTL9Q8TC94 416 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 EEF1AKMT1Q8WVE0 214 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 POP5Q969H6 163 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 NARS2Q96I59 477 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 RNF145Q96MT1 663 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 MS4A4EQ96PG1 132 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 PANX2Q96RD6 677 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 PCBD2Q9H0N5 130 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 C16orf95Q9H693 158 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 RPF2Q9H7B2 306 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 PALMDQ9NP74 551 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 ISYNA1Q9NPH2 558 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 BFARQ9NZS9 450 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 SLC22A14Q9Y267 594 aa2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 CARHSP1Q9Y2V2 147 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-206ENST00000508524 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF726A6NNF4 738 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 BTNL10A8MVZ5 291 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 HACD1B0YJ81 288 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CDH16O75309 829 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 ERLIN1O75477 346 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 VAPBO95292 243 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 GUCA1CO95843 209 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CRYBA1P05813 215 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 SLC35E2BP0CK96 405 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CD28P10747 220 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CPN2P22792 545 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 EVI2BP34910 448 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CSNK1A1P48729 337 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CX3CR1P49238 355 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CDKN2DP55273 166 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 STXBP1P61764 594 aaKnown RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 PITPNAQ00169 270 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 PDK4Q16654 411 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 DGUOKQ16854 277 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 PLPPR5Q32ZL2 321 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 ALKBH6Q3KRA9 238 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 TRMT12Q53H54 448 aaKnown RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 DUPD1Q68J44 220 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 CEMP1Q6PRD7 247 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 LRRC6Q86X45 466 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 GTPBP8Q8N3Z3 284 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 RNF10Q8N5U6 811 aaKnown RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 TEX29Q8N6K0 151 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 TM4SF18Q96CE8 201 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms