RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 TRAV18A0A075B6X5 111 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MEIKINA0A087WXM9 373 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 IGHV2-70DA0A0C4DH43 119 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 KIR2DS1A0A191URI9 304 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 ODAMA1E959 279 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM172BPA6NC97 362 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 A8MXK9 166 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MCRIP1C9JLW8 97 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MMP23AO75900 390 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 IGHV3-7P01780 117 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MT-ND4P03905 459 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 RCC1P18754 421 aaPredicted RBP7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 RAB6AP20340 208 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 OMGP23515 440 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 CDK2P24941 298 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 GDNFP39905 211 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 DVL1P1P54792 670 aaPredicted RBP7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 P2RX3P56373 397 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 CDNFQ49AH0 187 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 METTL11BQ5VVY1 283 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 DCAF12L2Q5VW00 463 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 OR10R2Q8NGX6 335 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 SETD6Q8TBK2 473 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MRGPRDQ8TDS7 321 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MAFIPQ8WZ33 124 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 RAB3CQ96E17 227 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 PCGF1Q9BSM1 259 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 TMPRSS13Q9BYE2 586 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 SLIRPQ9GZT3 109 aaKnown RBP7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 C6orf62Q9GZU0 229 aaPredicted RBP7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM234AQ9H0X4 552 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 C7orf69Q9H7B7 122 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 SIRT7Q9NRC8 400 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 OPN4Q9UHM6 478 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MRPS7Q9Y2R9 242 aaKnown RBP7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 INSIG2Q9Y5U4 225 aa7.27□□□□□ -1.25
SCAMP1-202ENST00000506858 MEIS3P1A6NDR6 274 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 TMEM235A6NFC5 223 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 CD5LO43866 347 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 GLP1RP43220 463 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 NPY4RP50391 375 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 KLRD1Q13241 179 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 CR1LQ2VPA4 569 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 RNASE12Q5GAN4 147 aaKnown RBP7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF782Q6ZMW2 699 aaPredicted RBP7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF497Q6ZNH5 498 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 TRAPPC6BQ86SZ2 158 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 GLCCI1Q86VQ1 547 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 LAX1Q8IWV1 398 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 PNKDQ8N490 385 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 C11orf42Q8N5U0 333 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 Q8N7P7 452 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 LY6G5BQ8NDX9 201 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 OR56B1Q8NGI3 324 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 OR5D13Q8NGL4 314 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 NUDCD2Q8WVJ2 157 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 BCL7BQ9BQE9 202 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 IFT22Q9H7X7 185 aa7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 SEBOXQ9HB31 216 aaPredicted RBP7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF230Q9UIE0 474 aaPredicted RBP7.26□□□□□ -1.25
SCAMP1-202ENST00000506858 DSCAML1Q8TD84 2053 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 TRAV20A0A0B4J274 112 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 METTL21EPA6NDL7 271 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A10PA6NDY2 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A18PA6NE21 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A16PA6NEW6 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A20PA6NIJ5 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A8PA6NJQ4 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A7PA6NKC0 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A22PA8MWA6 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A12PA8MX19 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A5PA8MXJ8 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A23PA8MXZ1 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM25AB3EWG3 89 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM25CB3EWG5 89 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM25GB3EWG6 89 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 RGS5O15539 181 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 ENSAO43768 121 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A15PP0C7V4 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A13PP0C7W8 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A14PP0C7W9 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM90A24PP0C7X0 464 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 HIST1H1DP16402 221 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 PAX6P26367 422 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 SSTR5P35346 364 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 SOX6P35712 828 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 DLX6P56179 175 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 PAX8Q06710 450 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 PRAMEF5Q5TYX0 476 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 CD276Q5ZPR3 534 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 LINC00596Q86U02 117 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 CROCCP3Q8IVE0 287 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 PRR18Q8N4B5 295 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 MCFD2Q8NI22 146 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 PPP1R35Q8TAP8 253 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 MRPL30Q8TCC3 161 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 LEAP2Q969E1 77 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 TBX15Q96SF7 602 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 CCDC59Q9P031 241 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNRD1Q9P1U0 126 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms