RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 FAM46BQ96A09 425 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 CLEC7AQ9BXN2 247 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 TMEM59Q9BXS4 323 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 BANF2Q9H503 90 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 IGHV2-26A0A0B4J1V2 119 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 TRDV1A0A1B0GX56 115 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 SLC17A2O00624 439 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 CA11O75493 328 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 TNFAIP8O95379 198 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 MPIG6BO95866 241 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 IGHV4-59P01825 116 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 CRYBA1P05813 215 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 GLAP06280 429 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
SNCA-209ENST00000506244 RAB11BQ15907 218 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 AANATQ16613 207 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 PRAMEF5Q5TYX0 476 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 SLC35E4Q6ICL7 350 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 RAB12Q6IQ22 244 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 RTN4RL2Q86UN3 420 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 TMEM104Q8NE00 496 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 PLPPR1Q8TBJ4 325 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 DYRK2Q92630 601 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 VCX3AQ9NNX9 186 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 RAB9BQ9NP90 201 aa13.58□□□□□ -0.24
SNCA-209ENST00000506244 TRAV1-2A0A0B4J238 106 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 KBTBD11-OT1A0A1B0GTJ5 212 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 TMEM89A2RUT3 159 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 PDCD6O75340 191 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 IL1AP01583 271 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 VSIG8P0DPA2 414 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 HKR1P10072 659 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 CD37P11049 281 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 FUT3P21217 361 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
SNCA-209ENST00000506244 FOXL1Q12952 345 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 LRRC75BQ2VPJ9 315 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 MINOS1Q5TGZ0 78 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 GDPGP1Q6ZNW5 385 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 OR2W3Q7Z3T1 314 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 CHIAQ9BZP6 476 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 TNFRSF19Q9NS68 423 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 CALYQ9NYX4 217 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 VPREB3Q9UKI3 123 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 MINOS1-NBL1R4GNA1 71 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 V9GY05 133 aa13.57□□□□□ -0.24
SNCA-209ENST00000506244 AIPO00170 330 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 ARSBP15848 533 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 CD34P28906 385 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 RPS27AP62979 156 aaKnown RBP13.56□□□□□ -0.24
SNCA-209ENST00000506244 OR10A7Q8NGE5 316 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 OR13A1Q8NGR1 328 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 MRGPRDQ8TDS7 321 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 NEDD4LQ96PU5 975 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 URM1Q9BTM9 101 aaKnown RBP13.56□□□□□ -0.24
SNCA-209ENST00000506244 MEGF9Q9H1U4 602 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 ETAA1Q9NY74 926 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 ZNF581Q9P0T4 197 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 STUB1Q9UNE7 303 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 AK6Q9Y3D8 172 aaKnown RBP13.56□□□□□ -0.24
SNCA-209ENST00000506244 PEX16Q9Y5Y5 336 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 STAB1Q9NY15 2570 aa13.56□□□□□ -0.24
SNCA-209ENST00000506244 GZMHP20718 246 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 ARHGDIBP52566 201 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 NEDD8Q15843 81 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 C17orf58Q2M2W7 97 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 C6orf183Q5T699 404 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 SYT6Q5T7P8 510 aaPredicted RBP13.55□□□□□ -0.24
SNCA-209ENST00000506244 TRAT1Q6PIZ9 186 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 ZNF497Q6ZNH5 498 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 ABHD12Q8N2K0 398 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 NDNFQ8TB73 568 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 MALSU1Q96EH3 234 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 KIRREL1Q96J84 757 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 SSR3Q9UNL2 185 aa13.55□□□□□ -0.24
SNCA-209ENST00000506244 A0A087WXM4 84 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 A0A087X0M5 115 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 A0A1B0GX30 115 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 FAM181BA6NEQ2 426 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 TMEM14DPA8MWL7 114 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 TOR1AO14656 332 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 GPR137BO60478 399 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 MMP23AO75900 390 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 OMGP23515 440 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 HTR1DP28221 377 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 FGF9P31371 208 aaPredicted RBP13.54□□□□□ -0.24
SNCA-209ENST00000506244 P2RY14Q15391 338 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 TMEM30BQ3MIR4 351 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 NKAPLQ5M9Q1 402 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 C22orf42Q6IC83 251 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 LIAT1Q6ZQX7 453 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 LHFPL4Q7Z7J7 247 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 C17orf50Q8WW18 174 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 GFI1Q99684 422 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 SSX3Q99909 188 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms