RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ST8SIA4Q92187 359 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 RAB1CQ92928 201 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PHF21AQ96BD5 680 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 RAB3CQ96E17 227 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 TIMD4Q96H15 378 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ARHGAP5-AS1Q96IT6 56 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 SNX22Q96L94 193 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 LURAP1Q96LR2 239 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 GAFA1Q96PS6 74 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 TMEM246Q9BRR3 403 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PECRQ9BY49 303 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 SHARPINQ9H0F6 387 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF665Q9H7R5 613 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PLEKHJ1Q9NW61 149 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF581Q9P0T4 197 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 KCNK7Q9Y2U2 307 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 V9GYH0 126 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ABCA1O95477 2261 aa6□□□□□ -1.45
NUP54-204ENST00000506098 TRAV18A0A075B6X5 111 aa6□□□□□ -1.45
NUP54-204ENST00000506098 IGHV3OR15-7A0A075B7D8 119 aa6□□□□□ -1.45
NUP54-204ENST00000506098 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
NUP54-204ENST00000506098 POM121CA8CG34 1229 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SERPINE3A8MV23 424 aa6□□□□□ -1.45
NUP54-204ENST00000506098 F5H0A9 414 aaPredicted RBP6□□□□□ -1.45
NUP54-204ENST00000506098 K7N7A8 449 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SULT1C2O00338 296 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SIGLEC5O15389 551 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SSX4O60224 188 aa6□□□□□ -1.45
NUP54-204ENST00000506098 PSPNO60542 156 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ZNF205O95201 554 aa6□□□□□ -1.45
NUP54-204ENST00000506098 GYPAP02724 150 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ZNF44P15621 663 aa6□□□□□ -1.45
NUP54-204ENST00000506098 HIST1H1DP16402 221 aaKnown RBP6□□□□□ -1.45
NUP54-204ENST00000506098 DUSP1P28562 367 aa6□□□□□ -1.45
NUP54-204ENST00000506098 HTR2BP41595 481 aa6□□□□□ -1.45
NUP54-204ENST00000506098 GPR6P46095 362 aaPredicted RBP6□□□□□ -1.45
NUP54-204ENST00000506098 KCNJ3P48549 501 aa6□□□□□ -1.45
NUP54-204ENST00000506098 CEBPDP49716 269 aaPredicted RBP6□□□□□ -1.45
NUP54-204ENST00000506098 SNU13P55769 128 aaKnown RBP6□□□□□ -1.45
NUP54-204ENST00000506098 TAS2R20P59543 309 aa6□□□□□ -1.45
NUP54-204ENST00000506098 GMFBP60983 142 aa6□□□□□ -1.45
NUP54-204ENST00000506098 MRPS10P82664 201 aaKnown RBP6□□□□□ -1.45
NUP54-204ENST00000506098 PITPNAQ00169 270 aa6□□□□□ -1.45
NUP54-204ENST00000506098 RBM39Q14498 530 aaKnown RBP6□□□□□ -1.45
NUP54-204ENST00000506098 PDCD1Q15116 288 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ZNF79Q15937 498 aa6□□□□□ -1.45
NUP54-204ENST00000506098 CDNFQ49AH0 187 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SPANXN2Q5MJ10 180 aa6□□□□□ -1.45
NUP54-204ENST00000506098 TMEM69Q5SWH9 247 aa6□□□□□ -1.45
NUP54-204ENST00000506098 HACD4Q5VWC8 232 aa6□□□□□ -1.45
NUP54-204ENST00000506098 PRSS57Q6UWY2 283 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SLC36A1Q7Z2H8 476 aa6□□□□□ -1.45
NUP54-204ENST00000506098 C6orf201Q7Z4U5 140 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ZNF525Q8N782 197 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SUMF2Q8NBJ7 301 aa6□□□□□ -1.45
NUP54-204ENST00000506098 DEFB108BQ8NET1 73 aa6□□□□□ -1.45
NUP54-204ENST00000506098 OR5D13Q8NGL4 314 aa6□□□□□ -1.45
NUP54-204ENST00000506098 C10orf105Q8TEF2 133 aa6□□□□□ -1.45
NUP54-204ENST00000506098 FAM168AQ92567 244 aa6□□□□□ -1.45
NUP54-204ENST00000506098 MARC2Q969Z3 335 aa6□□□□□ -1.45
NUP54-204ENST00000506098 NEDD4LQ96PU5 975 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ABHD1Q96SE0 405 aa6□□□□□ -1.45
NUP54-204ENST00000506098 SULT4A1Q9BR01 284 aa6□□□□□ -1.45
NUP54-204ENST00000506098 DPCDQ9BVM2 203 aaPredicted RBP6□□□□□ -1.45
NUP54-204ENST00000506098 FAM234AQ9H0X4 552 aa6□□□□□ -1.45
NUP54-204ENST00000506098 NARFLQ9H6Q4 476 aa6□□□□□ -1.45
NUP54-204ENST00000506098 AUNIPQ9H7T9 357 aa6□□□□□ -1.45
NUP54-204ENST00000506098 C19orf12Q9NSK7 152 aa6□□□□□ -1.45
NUP54-204ENST00000506098 MIOXQ9UGB7 285 aa6□□□□□ -1.45
NUP54-204ENST00000506098 OR14J1Q9UGF5 321 aa6□□□□□ -1.45
NUP54-204ENST00000506098 MAB21L2Q9Y586 359 aa6□□□□□ -1.45
NUP54-204ENST00000506098 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
NUP54-204ENST00000506098 ASH1LQ9NR48 2969 aaKnown RBP6□□□□□ -1.45
NUP54-204ENST00000506098 NAV2Q8IVL1 2488 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 TRBV6-6A0A0A6YYG2 114 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 A0A0G2JMP0 313 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 A0A0X1KG70 313 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 NKX6-3A6NJ46 265 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 MCRIP1C9JLW8 97 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SIRPB1O00241 398 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 MGST3O14880 152 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 PPIHO43447 177 aaKnown RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 GSTZ1O43708 216 aaPredicted RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 FCN3O75636 299 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 NAPSAO96009 420 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 TK1P04183 234 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 WNT2P09544 360 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 GNB3P16520 340 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 CD40LGP29965 261 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ERP29P30040 261 aaKnown RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 PRSS3P35030 304 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 GABRA2P47869 451 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 OR3A1P47881 315 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 RAB13P51153 203 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 NKX2-5P52952 324 aaPredicted RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 PPP5CP53041 499 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 IL13RA1P78552 427 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SCN1BQ07699 218 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 IL18Q14116 193 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SRSF7Q16629 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms