RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 LYZL2Q7Z4W2 148 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 MOB3BQ86TA1 216 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ONECUT1Q9UBC0 465 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 S100A2P29034 98 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ITLN1Q8WWA0 313 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 RYDENQ9NUL5 291 aaKnown RBP12.15□□□□□ -0.46
TCOF1-207ENST00000504761 RASL12Q9NYN1 266 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 TMED3Q9Y3Q3 217 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ATXN7O15265 892 aaPredicted RBP12.15□□□□□ -0.47
TCOF1-207ENST00000504761 H2AFB1P0C5Y9 115 aa12.15□□□□□ -0.47
TCOF1-207ENST00000504761 OR13C7P0DN81 318 aa12.15□□□□□ -0.47
TCOF1-207ENST00000504761 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.47
TCOF1-207ENST00000504761 UNC119Q13432 240 aa12.15□□□□□ -0.47
TCOF1-207ENST00000504761 RPL36A-HNRNPH2H7BZ11 118 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 STRAPQ9Y3F4 350 aaKnown RBP12.14□□□□□ -0.47
TCOF1-207ENST00000504761 PPP1CCP36873 323 aaKnown RBP12.14□□□□□ -0.47
TCOF1-207ENST00000504761 FGF12P61328 243 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 SEZ6L2Q6UXD5 910 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 RBMXL3Q8N7X1 1067 aaKnown RBP12.14□□□□□ -0.47
TCOF1-207ENST00000504761 ZNF485Q8NCK3 441 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
TCOF1-207ENST00000504761 GHITMQ9H3K2 345 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 KCNMB2Q9Y691 235 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 BCL2L11O43521 198 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 DTYMKP23919 212 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 C20orf24Q9BUV8 137 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 RAXQ9Y2V3 346 aa12.14□□□□□ -0.47
TCOF1-207ENST00000504761 RANBP2P49792 3224 aaKnown RBP12.14□□□□□ -0.47
TCOF1-207ENST00000504761 C17orf112F2Z3M2 114 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 AQP7O14520 342 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 S100PP25815 95 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TAS2R30P59541 319 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 HAGHQ16775 308 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 STUMQ69YW2 141 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 CALHM1Q8IU99 346 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 SPRR3Q9UBC9 169 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
TCOF1-207ENST00000504761 hADV38S2A0JD32 116 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 ANKRD34BA5PLL1 514 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 CRYZL1O95825 349 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 CPN1P15169 458 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-207ENST00000504761 GGNQ86UU5 652 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 LINC00470Q9BZP3 86 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TAAR5O14804 337 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 PRDX2P32119 198 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 COL10A1Q03692 680 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 CCL13Q99616 98 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 OR2H2O95918 312 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 METTL15P1P0C7V9 234 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 OR6C3Q9NZP0 311 aa12.13□□□□□ -0.47
TCOF1-207ENST00000504761 SCGB2A1O75556 95 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 NAT2P11245 290 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 CHATP28329 748 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 KCNJ3P48549 501 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 RAB4BP61018 213 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 DHRS7CA6NNS2 312 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 ALX3O95076 343 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 CECR9P0C854 216 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 RPS2P15880 293 aaKnown RBP12.12□□□□□ -0.47
TCOF1-207ENST00000504761 IGHV1-2P23083 117 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 P2RX3P56373 397 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 SVBPQ8N300 66 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 SERTAD4Q9NUC0 356 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 LRRK1Q38SD2 2015 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 IGF2RP11717 2491 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 ST8SIA5O15466 376 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 SOX15O60248 233 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 CRHP06850 196 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 AQP3Q92482 292 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 TIMM8BQ9Y5J9 83 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-207ENST00000504761 PTPRQQ9UMZ3 2332 aa12.12□□□□□ -0.47
TCOF1-207ENST00000504761 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
TCOF1-207ENST00000504761 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
TCOF1-207ENST00000504761 MRGPRFQ96AM1 343 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms