RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 A0A1W2PPE2 198 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 A0A1W2PR64 198 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 A0A1W2PRV1 198 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 FOXI3A8MTJ6 420 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 C17orf98A8MV24 154 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 CA11O75493 328 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 RBP4P02753 201 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF728P0DKX0 622 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 CCL3L1P16619 93 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 PRTN3P24158 256 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 TMBIM6P55061 237 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 PLA2G7Q13093 441 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 IDNKQ5T6J7 187 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 METAP1DQ6UB28 335 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF497Q6ZNH5 498 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 IL17RELQ6ZVW7 336 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 CLVS1Q8IUQ0 354 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 OR56B1Q8NGI3 324 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 NEK7Q8TDX7 302 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 RAB2BQ8WUD1 216 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 SLC25A46Q96AG3 418 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF714Q96N38 554 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 NEDD4LQ96PU5 975 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 TAS2R3Q9NYW6 316 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 KIF25Q9UIL4 384 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 HSF4Q9ULV5 492 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 ETV7Q9Y603 341 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 MEIKINA0A087WXM9 373 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 SOCS1O15524 211 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 MT-ND4P03905 459 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 FAM157CP0CG43 387 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 CGB3P0DN86 165 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 CGB7P0DN87 165 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 SRD5A1P18405 259 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 SRP14P37108 136 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 VEGFCP49767 419 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 EFNB2P52799 333 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 TMEM50BP56557 158 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 BPIFB3P59826 476 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 KLF17Q5JT82 389 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 USP43Q70EL4 1123 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 GAPTQ8N292 157 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 LGALS14Q8TCE9 139 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 ETAA1Q9NY74 926 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 ABRACLQ9P1F3 81 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 NUP50Q9UKX7 468 aa9.76□□□□□ -0.85
PDLIM5-208ENST00000504489 SVEP1Q4LDE5 3571 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 UBE2QL1A1L167 161 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF729A6NN14 1252 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 RAB27BO00194 218 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 PAHP00439 452 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 GZMHP20718 246 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 ERVFRD-1P60508 538 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 NKAPLQ5M9Q1 402 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 GPR157Q5UAW9 335 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 NCR3LG1Q68D85 454 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 Q6ZTK2 550 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 C6orf201Q7Z4U5 140 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 TRAPPC6BQ86SZ2 158 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF565Q8N9K5 539 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 NDNFQ8TB73 568 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 SULT4A1Q9BR01 284 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 FAAP24Q9BTP7 215 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 DCSTAMPQ9H295 470 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 GAL3ST2Q9H3Q3 398 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 LINC00574Q9H8X3 128 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 PLEKHJ1Q9NW61 149 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 SPATA2Q9UM82 520 aa9.75□□□□□ -0.85
PDLIM5-208ENST00000504489 TRAV40A0A0B4J280 105 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 KBTBD11-OT1A0A1B0GTJ5 212 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 MEX3AA1L020 520 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 SCGNO76038 276 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 IGHV4-38-2P0DP08 117 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 RORCP51449 518 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 SCGB2A2Q13296 93 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 DYNC1I2Q13409 638 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 PLAC9Q5JTB6 97 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 HEPN1Q6WQI6 88 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 OR13A1Q8NGR1 328 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 OR5H6Q8NGV6 325 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 DYRK2Q92630 601 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 LHX4Q969G2 390 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 ARHGAP5-AS1Q96IT6 56 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 PECRQ9BY49 303 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 ATG5Q9H1Y0 275 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 HEXA-AS1Q9H8Q6 139 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 RHBDL2Q9NX52 303 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms