RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PCDHB10Q9UN67 800 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 SHANK1Q9Y566 2161 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 SPRY3O43610 288 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 ZNF205O95201 554 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 SNRPD2P62316 118 aaKnown RBP18.54■□□□□ 0.56
PTPN13-205ENST00000502971 FGL1Q08830 312 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 ABCA11PQ4W5N1 156 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 OR5T2Q8NGG2 359 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 PDCD10Q9BUL8 212 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 RSRP1Q9BUV0 290 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 SEBOXQ9HB31 216 aaPredicted RBP18.54■□□□□ 0.56
PTPN13-205ENST00000502971 RAB18Q9NP72 206 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 POLEQ07864 2286 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 IGSF10Q6WRI0 2623 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 SRRM5B3KS81 715 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 IFNA2P01563 188 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 GATA4P43694 442 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 KCNJ3P48549 501 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 PIGPP57054 158 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 HERPUD1Q15011 391 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 LGALSLQ3ZCW2 172 aaPredicted RBP18.53■□□□□ 0.56
PTPN13-205ENST00000502971 CABLES2Q9BTV7 478 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 COQ3Q9NZJ6 369 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 WIPI2Q9Y4P8 454 aa18.53■□□□□ 0.56
PTPN13-205ENST00000502971 TEX13DA0A0J9YY54 714 aaPredicted RBP18.52■□□□□ 0.56
PTPN13-205ENST00000502971 HMSDA8MTL9 139 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 CCSO14618 274 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 BET1O15155 118 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 ANKRD55Q3KP44 614 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 IL19Q9UHD0 177 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 TRAPPC2LQ9UL33 140 aa18.52■□□□□ 0.56
PTPN13-205ENST00000502971 COL6A6A6NMZ7 2263 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 IGKV1-6A0A0C4DH72 117 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 RFPL4AA6NLU0 287 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 VSTM5A8MXK1 200 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 RFPL4AL1F8VTS6 287 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 TUSC2O75896 110 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 RCC1P18754 421 aaPredicted RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 TNFSF4P23510 183 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 RBMXP38159 391 aaKnown RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 CEBPDP49716 269 aaPredicted RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 ATXN7L3Q14CW9 347 aaPredicted RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 GSG1LQ6UXU4 331 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 ITLN1Q8WWA0 313 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 RNASE6Q93091 150 aaKnown RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 MBNL3Q9NUK0 354 aaKnown RBP18.52■□□□□ 0.55
PTPN13-205ENST00000502971 KCNIP3Q9Y2W7 256 aa18.52■□□□□ 0.55
PTPN13-205ENST00000502971 SMG1Q96Q15 3661 aaKnown RBP18.51■□□□□ 0.55
PTPN13-205ENST00000502971 CHD6Q8TD26 2715 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 KALRNO60229 2985 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 PSPNO60542 156 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 SLC35E4Q6ICL7 350 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 FAM185AQ8N0U4 392 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 CCDC71LQ8N9Z2 235 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 RTN4IP1Q8WWV3 396 aaPredicted RBP18.51■□□□□ 0.55
PTPN13-205ENST00000502971 GALNT14Q96FL9 552 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 ESRP2Q9H6T0 727 aaKnown RBP18.51■□□□□ 0.55
PTPN13-205ENST00000502971 NAA60Q9H7X0 242 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 COMMD9Q9P000 198 aa18.51■□□□□ 0.55
PTPN13-205ENST00000502971 TRBV6-7A0A0A0MS04 114 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 TMEM30CPA0ZSE6 113 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 FAM25EA8MYX2 175 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 NPIPB11E5RHQ5 1161 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 IGHV1-46P01743 117 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 C4BPBP20851 252 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 SERPINF1P36955 418 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 TNFAIP6P98066 277 aaPredicted RBP18.5■□□□□ 0.55
PTPN13-205ENST00000502971 CYCSP99999 105 aaKnown RBP18.5■□□□□ 0.55
PTPN13-205ENST00000502971 ADIPOQQ15848 244 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 C5orf24Q7Z6I8 188 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 MOGAT3Q86VF5 341 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 ERGIC1Q969X5 290 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 DIRC2Q96SL1 478 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 SLC2A9Q9NRM0 540 aa18.5■□□□□ 0.55
PTPN13-205ENST00000502971 C5orf51A6NDU8 294 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 OR4A8P0C604 315 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 SORDQ00796 357 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 NCMAPQ5T1S8 102 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 GCSAMQ8N6F7 178 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 OR10J5Q8NHC4 309 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 LRRC46Q96FV0 321 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 SEC22AQ96IW7 307 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 NMES1Q9C002 83 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 LHBP01229 141 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 EGR1P18146 543 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 COL10A1Q03692 680 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 SPRNQ5BIV9 151 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 ZNF565Q8N9K5 539 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 GALNT11Q8NCW6 608 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 LILRB4Q8NHJ6 448 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 VRK1Q99986 396 aaPredicted RBP18.49■□□□□ 0.55
PTPN13-205ENST00000502971 NDRG3Q9UGV2 375 aa18.49■□□□□ 0.55
PTPN13-205ENST00000502971 CADP27708 2225 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 TRAV14DV4A0A0A6YYC5 116 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 FAM90A27PA6NNH2 459 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.48■□□□□ 0.55
PTPN13-205ENST00000502971 ADH4P08319 380 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 PRDX2P32119 198 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 ADORA2A-AS1P86434 159 aa18.48■□□□□ 0.55
PTPN13-205ENST00000502971 HMGN3Q15651 99 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms