RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PIP4P2Q8N4L2 257 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 URM1Q9BTM9 101 aaKnown RBP20.52■□□□□ 0.88
LSM6-202ENST00000502781 HEXA-AS1Q9H8Q6 139 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 LIN7BQ9HAP6 207 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 SOX21Q9Y651 276 aaPredicted RBP20.52■□□□□ 0.88
LSM6-202ENST00000502781 KIAA2026Q5HYC2 2103 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 MEIKINA0A087WXM9 373 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 FOXI3A8MTJ6 420 aaPredicted RBP20.51■□□□□ 0.87
LSM6-202ENST00000502781 CA11O75493 328 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 SLC2A2P11168 524 aaPredicted RBP20.51■□□□□ 0.87
LSM6-202ENST00000502781 SFXN4Q6P4A7 337 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 ZNF497Q6ZNH5 498 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 TRAPPC6BQ86SZ2 158 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 OR13A1Q8NGR1 328 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 CYYR1Q96J86 154 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 GAL3ST2Q9H3Q3 398 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 PRDM13Q9H4Q3 707 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 OCEL1Q9H607 264 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 LINC00574Q9H8X3 128 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 ATRQ13535 2644 aa20.51■□□□□ 0.87
LSM6-202ENST00000502781 A0A0A6YYJ9 748 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 TMEM30CPA0ZSE6 113 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 PLA2G7Q13093 441 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 HEPN1Q6WQI6 88 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 ZNF782Q6ZMW2 699 aaPredicted RBP20.5■□□□□ 0.87
LSM6-202ENST00000502781 PDZD9Q8IXQ8 264 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 NEK7Q8TDX7 302 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 ZNF48Q96MX3 618 aaPredicted RBP20.5■□□□□ 0.87
LSM6-202ENST00000502781 NEDD4LQ96PU5 975 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 SUCNR1Q9BXA5 334 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 RAB22AQ9UL26 194 aa20.5■□□□□ 0.87
LSM6-202ENST00000502781 A0A0B4J203 849 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 ZNF729A6NN14 1252 aaPredicted RBP20.49■□□□□ 0.87
LSM6-202ENST00000502781 MMP23AO75900 390 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 CLPXO76031 633 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 MT-ND4P03905 459 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 TGFBR1P36897 503 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 MXD1Q05195 221 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 C17orf58Q2M2W7 97 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 SLC16A12Q6ZSM3 486 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 ZNF565Q8N9K5 539 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 ZNF418Q8TF45 676 aaPredicted RBP20.49■□□□□ 0.87
LSM6-202ENST00000502781 PTX4Q96A99 478 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 ETAA1Q9NY74 926 aa20.49■□□□□ 0.87
LSM6-202ENST00000502781 KBTBD11-OT1A0A1B0GTJ5 212 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 RAB6AP20340 208 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 EFNB2P52799 333 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 TMEM50BP56557 158 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 HILS1P60008 231 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 KRTAP21-3Q3LHN1 58 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 DYRK2Q92630 601 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 SESN1Q9Y6P5 492 aa20.48■□□□□ 0.87
LSM6-202ENST00000502781 NPFFO15130 113 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 SOCS1O15524 211 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 CDK2P24941 298 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 BLVRBP30043 206 aaPredicted RBP20.47■□□□□ 0.87
LSM6-202ENST00000502781 GLP1RP43220 463 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 LSM3P62310 102 aaKnown RBP20.47■□□□□ 0.87
LSM6-202ENST00000502781 NKAPLQ5M9Q1 402 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 C6orf201Q7Z4U5 140 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 ANKRD13BQ86YJ7 626 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 SULT4A1Q9BR01 284 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 DAPK2Q9UIK4 370 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 HSF4Q9ULV5 492 aa20.47■□□□□ 0.87
LSM6-202ENST00000502781 UBE2QL1A1L167 161 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 NPIPB11E5RHQ5 1161 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 TCF21O43680 179 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 GZMHP20718 246 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 DEFB112Q30KQ8 113 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 PNKDQ8N490 385 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 SIGLECL1Q8N7X8 197 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 OR11H6Q8NGC7 330 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 OR56B1Q8NGI3 324 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 MRGPRDQ8TDS7 321 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 CALYQ9NYX4 217 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 TMEM127O75204 238 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 GABARAPO95166 117 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 IL1AP01583 271 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 SAA4P35542 130 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 GDNFP39905 211 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 VEGFCP49767 419 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 MIDNQ504T8 468 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 PRAMEF5Q5TYX0 476 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 OR13D1Q8NGV5 346 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 AJUBAQ96IF1 538 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 TMEM133Q9H2Q1 129 aa20.46■□□□□ 0.87
LSM6-202ENST00000502781 TRAV39A0A0B4J263 110 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 A0A0U1RQK1 487 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 ODF3BA8MYP8 253 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 OMGP23515 440 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 COX7A1P24310 79 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 RPS19P39019 145 aaKnown RBP20.45■□□□□ 0.86
LSM6-202ENST00000502781 SCAND1P57086 179 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 NCS1P62166 190 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 FAM189A2Q15884 450 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 CTF1Q16619 201 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 RTN4RL2Q86UN3 420 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 KIRREL1Q96J84 757 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 FAAP24Q9BTP7 215 aa20.45■□□□□ 0.86
LSM6-202ENST00000502781 NAA50Q9GZZ1 169 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms