RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TAF9Q16594 264 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 MIDNQ504T8 468 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 RSBN1Q5VWQ0 802 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 Q6YL49 198 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 LDLRAD3Q86YD5 345 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 SUMF2Q8NBJ7 301 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 PLPPR1Q8TBJ4 325 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM216AQ8WUB2 273 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 CORO2AQ92828 525 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 Q96M66 194 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 SELENOIQ9C0D9 397 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 NCOR1P1Q9H4R4 102 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 SPACA1Q9HBV2 294 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 TAS2R3Q9NYW6 316 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 OR6C3Q9NZP0 311 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 KIF25Q9UIL4 384 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 DNHD1Q96M86 4753 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 MEIKINA0A087WXM9 373 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 TRAV1-2A0A0B4J238 106 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 A0A1W2PRD5 423 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 A0A1W2PRF3 423 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 A0A1W2PRM7 423 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 MEIOCA2RUB1 952 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 SLC17A2O00624 439 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 TNFAIP8O95379 198 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 GHRHP01286 108 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 COX7A1P24310 79 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 SYT6Q5T7P8 510 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-208ENST00000497892 HEPN1Q6WQI6 88 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 TMEM86BQ8N661 226 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 SSMEM1Q8WWF3 244 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 FAM46BQ96A09 425 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 SLC25A28Q96A46 364 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 DUX5Q96PT3 197 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 BARHL1Q9BZE3 327 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 BANF2Q9H503 90 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 PLGRKTQ9HBL7 147 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 ING3Q9NXR8 418 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 ZNRD1Q9P1U0 126 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 FAM96BQ9Y3D0 163 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 AK6Q9Y3D8 172 aaKnown RBP9.15□□□□□ -0.94
ERCC8-208ENST00000497892 POMT1Q9Y6A1 747 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 SESN1Q9Y6P5 492 aa9.15□□□□□ -0.94
ERCC8-208ENST00000497892 TENM1Q9UKZ4 2725 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 SHISA3A0PJX4 238 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 ZNF729A6NN14 1252 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-208ENST00000497892 ODF3BA8MYP8 253 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 BPNT1O95861 308 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 PAHP00439 452 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 CFPP27918 469 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 FGF9P31371 208 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-208ENST00000497892 RPS27AP62979 156 aaKnown RBP9.14□□□□□ -0.95
ERCC8-208ENST00000497892 QRFPP83859 136 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 UNC119Q13432 240 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 NEDD8Q15843 81 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 ATAD3CQ5T2N8 411 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 PRAMEF5Q5TYX0 476 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 ZNF626Q68DY1 528 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 SLC35E4Q6ICL7 350 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 RAB12Q6IQ22 244 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 OR13A1Q8NGR1 328 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 OR13D1Q8NGV5 346 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 KCNG3Q8TAE7 436 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 AJUBAQ96IF1 538 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 TMEM59Q9BXS4 323 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 MRPL18Q9H0U6 180 aaKnown RBP9.14□□□□□ -0.95
ERCC8-208ENST00000497892 TMEM133Q9H2Q1 129 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 KCNK15Q9H427 330 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 STUB1Q9UNE7 303 aa9.14□□□□□ -0.95
ERCC8-208ENST00000497892 IGHV2-26A0A0B4J1V2 119 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 KBTBD11-OT1A0A1B0GTJ5 212 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 TMEM30CPA0ZSE6 113 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 TMEM14DPA8MWL7 114 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 H3BUI4 141 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 PDCD5O14737 125 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 MMP23AO75900 390 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 MPIG6BO95866 241 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 CGB3P0DN86 165 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 CGB7P0DN87 165 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 ARSBP15848 533 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 MYL9P24844 172 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 CDK2P24941 298 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 GLP1RP43220 463 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 IER3P46695 156 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 PSMD7P51665 324 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 RBM39Q14498 530 aaKnown RBP9.13□□□□□ -0.95
ERCC8-208ENST00000497892 P2RY14Q15391 338 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 RAB11BQ15907 218 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 SIGIRRQ6IA17 410 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 C22orf42Q6IC83 251 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 OR52W1Q6IF63 320 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 OR10K2Q6IF99 312 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 OR2W3Q7Z3T1 314 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 GAPTQ8N292 157 aa9.13□□□□□ -0.95
ERCC8-208ENST00000497892 ZNF565Q8N9K5 539 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms