RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 NUBP2Q9Y5Y2 271 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 PATJQ8NI35 1801 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 KIF20BQ96Q89 1820 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 ZNF236Q9UL36 1845 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 COL7A1Q02388 2944 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 IGLV11-55A0A075B6I3 123 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 KIR2DS1A0A191URI9 304 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 LEUTXA8MZ59 168 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 H3BSA7 217 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 HMGB3O15347 200 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 NUPL2O15504 423 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 CACNG3O60359 315 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GGCTO75223 188 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 CBR3O75828 277 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PIAS1O75925 651 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SLC22A5O76082 557 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TDP2O95551 362 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TTC4O95801 387 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 NDUFB10O96000 172 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SHBGP04278 402 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ADRA2AP08913 450 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TSPAN19P0C672 248 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 MYL2P10916 166 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 MLNP12872 115 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CBR1P16152 277 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CD36P16671 472 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PRPS1L1P21108 318 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CCNOP22674 350 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 HLA-DMAP28067 261 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GTF2E2P29084 291 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 OTX1P32242 354 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 CA5AP35218 305 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RPL22P35268 128 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 ARR3P36575 388 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 OMPP47874 163 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RBP2P50120 134 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RAB5CP51148 216 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 NKX2-5P52952 324 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RAB2AP61019 212 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PSME3P61289 254 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ARF6P62330 175 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 EIF5AP63241 154 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 MXD1Q05195 221 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 INCA1Q0VD86 236 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ERCC8Q13216 396 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 KIR2DS1Q14954 304 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 POU2AF1Q16633 256 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 AKIRIN2Q53H80 203 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 C5orf47Q569G3 176 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RNASE10Q5GAN6 216 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 SPANXN2Q5MJ10 180 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 C9orf135Q5VTT2 229 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 UBE2UQ5VVX9 321 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GPR107Q5VW38 600 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CARD17Q5XLA6 110 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CLEC6AQ6EIG7 209 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZNF773Q6PK81 442 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 METAP1DQ6UB28 335 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 LYPD2Q6UXB3 125 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CERS6Q6ZMG9 384 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RTL4Q6ZR62 310 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SLC16A14Q7RTX9 510 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SNX20Q7Z614 316 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TMCO2Q7Z6W1 182 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 GALNT10Q86SR1 603 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CRLF3Q8IUI8 442 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PCP2Q8IVA1 136 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZNF547Q8IVP9 402 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZBTB8OSQ8IWT0 167 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RIMKLAQ8IXN7 391 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 OFCC1Q8IZS5 231 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 C12orf45Q8N5I9 185 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZNF283Q8N7M2 679 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZNF321PQ8N8H1 164 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PRELID2Q8N945 189 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 Q8N976 141 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 FBXL13Q8NEE6 735 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 OR2L8Q8NGY9 312 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 OR5W2Q8NH69 310 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 NUBPLQ8TB37 319 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 CD300LFQ8TDQ1 290 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GPR151Q8TDV0 419 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SFT2D1Q8WV19 159 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 DCAKDQ8WVC6 231 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 C1orf54Q8WWF1 131 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GTF2H4Q92759 462 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RBPMSQ93062 196 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 TMBIM1Q969X1 311 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 KIAA1143Q96AT1 154 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 EXOSC8Q96B26 276 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 CREB3L1Q96BA8 519 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TM4SF18Q96CE8 201 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PIK3IP1Q96FE7 263 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 DYNLL2Q96FJ2 89 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 NARS2Q96I59 477 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 BTN2A3PQ96KV6 586 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 RNF157Q96PX1 679 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PFDN5Q99471 154 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SPIN2AQ99865 258 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms